RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CTRB2Q6GPI1 263 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 GINS4Q9BRT9 223 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 SLC2A9Q9NRM0 540 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 NDUFB11Q9NX14 153 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 SCN3BQ9NY72 215 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 OR2W1Q9Y3N9 320 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
COPS7A-221ENST00000546229 A0A075B6Q4 140 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 MPPED1O15442 326 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 CREBL2O60519 120 aaPredicted RBP9.36□□□□□ -0.91
COPS7A-221ENST00000546229 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 MYOD1P15172 320 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 NFYAP23511 347 aaPredicted RBP9.36□□□□□ -0.91
COPS7A-221ENST00000546229 GADD45AP24522 165 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 PSMD7P51665 324 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 ARFRP1Q13795 201 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 FAM209BQ5JX69 171 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 FYTTD1Q96QD9 318 aaKnown RBP9.36□□□□□ -0.91
COPS7A-221ENST00000546229 OR51E2Q9H255 320 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 TPRKBQ9Y3C4 175 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 S4R3C0 116 aa9.36□□□□□ -0.91
COPS7A-221ENST00000546229 PSMB6P28072 239 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 RPL27AP46776 148 aaKnown RBP9.35□□□□□ -0.91
COPS7A-221ENST00000546229 MRPS15P82914 257 aaKnown RBP9.35□□□□□ -0.91
COPS7A-221ENST00000546229 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 HACD4Q5VWC8 232 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 ZNF773Q6PK81 442 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 SLC25A42Q86VD7 318 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 OR2A7Q96R45 310 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 GPHA2Q96T91 129 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 GGTLC1Q9BX51 225 aa9.35□□□□□ -0.91
COPS7A-221ENST00000546229 TRDV1A0A1B0GX56 115 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 IGLC7A0M8Q6 106 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 TMEM235A6NFC5 223 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 MAS1LP35410 378 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 ARL3P36405 182 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 CLEC19AQ6UXS0 136 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 UXS1Q8NBZ7 420 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 VCXQ9H320 206 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 RBM7Q9Y580 266 aaKnown RBP9.34□□□□□ -0.91
COPS7A-221ENST00000546229 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
COPS7A-221ENST00000546229 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 J3QRK9 145 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 PDCD5O14737 125 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 ACTL6BO94805 426 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 CD36P16671 472 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 RAB3BP20337 219 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 GALP22466 123 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 RANBP1P43487 201 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 TNFRSF9Q07011 255 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 POU2AF1Q16633 256 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 TIMM50Q3ZCQ8 353 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 CDNFQ49AH0 187 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 ZNF57Q68EA5 555 aaPredicted RBP9.33□□□□□ -0.92
COPS7A-221ENST00000546229 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
COPS7A-221ENST00000546229 CENPOQ9BU64 300 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
COPS7A-221ENST00000546229 DCSTAMPQ9H295 470 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 BET1LQ9NYM9 111 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 MRPS7Q9Y2R9 242 aaKnown RBP9.33□□□□□ -0.92
COPS7A-221ENST00000546229 PRELID3BQ9Y3B1 194 aa9.33□□□□□ -0.92
COPS7A-221ENST00000546229 SMIM30A4D0T7 59 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 ANKRD65E5RJM6 399 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
COPS7A-221ENST00000546229 SLC22A5O76082 557 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 SCAF4O95104 1147 aaKnown RBP9.32□□□□□ -0.92
COPS7A-221ENST00000546229 S1PR2O95136 353 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 REG1AP05451 166 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 CTXN2P0C2S0 81 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 OR2B8PP59922 312 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 RPL8P62917 257 aaKnown RBP9.32□□□□□ -0.92
COPS7A-221ENST00000546229 MSMO1Q15800 293 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 SLC16A13Q7RTY0 426 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 MFSD4AQ8N468 514 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 VSTM2AQ8TAG5 236 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 TCTEX1D2Q8WW35 142 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 CCDC90BQ9GZT6 254 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 TAS2R8Q9NYW2 309 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 ANXA10Q9UJ72 324 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 TP53TG1Q9Y2A0 90 aa9.32□□□□□ -0.92
COPS7A-221ENST00000546229 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
COPS7A-221ENST00000546229 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
COPS7A-221ENST00000546229 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms