RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NRN1Q9NPD7 142 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 HEYLQ9NQ87 328 aaPredicted RBP11.81□□□□□ -0.52
SRP54-202ENST00000546080 UQCR10Q9UDW1 63 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 NAT8BQ9UHF3 227 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 IGHV3-43A0A0B4J1X8 118 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 WISP2O76076 250 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 MT-ND6P03923 174 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 IGHV3-43DP0DP04 118 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 PMCHP20382 165 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 DCAF12Q5T6F0 453 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 LYSMD4Q5XG99 296 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 WDR73Q6P4I2 378 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 SSMEM1Q8WWF3 244 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
SRP54-202ENST00000546080 C11orf52Q96A22 123 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 TXN2Q99757 166 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 SFXN3Q9BWM7 321 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 GP6Q9HCN6 339 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 FOXJ2Q9P0K8 574 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 PSG11Q9UQ72 335 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 V9GYV3 84 aa11.81□□□□□ -0.52
SRP54-202ENST00000546080 FREM1Q5H8C1 2179 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 ZNF253O75346 499 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 TDGF1P13385 188 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 OR10J3Q5JRS4 329 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 ST6GALNAC3Q8NDV1 305 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 B4GALT7Q9UBV7 327 aa11.8□□□□□ -0.52
SRP54-202ENST00000546080 HNRNPA3P51991 378 aaKnown RBP11.79□□□□□ -0.52
SRP54-202ENST00000546080 RHOBP62745 196 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 FBXW9Q5XUX1 488 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 Q6ZN92 141 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 C12orf49Q9H741 205 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 DIDO1Q9BTC0 2240 aaKnown RBP11.79□□□□□ -0.52
SRP54-202ENST00000546080 WDR87Q6ZQQ6 2873 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 KMT2EQ8IZD2 1858 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 SAA2-SAA4A0A096LPE2 208 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 DEFB108AA8MXU0 73 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 SPINK4O60575 86 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 FCGR3BO75015 233 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 MMP23AO75900 390 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 SSTR5P35346 364 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
SRP54-202ENST00000546080 EFNB3Q15768 340 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 SPATA31B1PQ5VZV4 182 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 VASH2Q86V25 355 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 COQ2Q96H96 371 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 ASCL3Q9NQ33 180 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 PPIAL4AQ9Y536 164 aa11.79□□□□□ -0.52
SRP54-202ENST00000546080 FAM166BA8MTA8 275 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 PRSS46E5RG02 174 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 WNT9BO14905 357 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 HYPMO75409 117 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 OR5G3P0C626 314 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 IGLC2P0DOY2 106 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 TMPRSS3P57727 454 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 KIAA1644Q3SXP7 199 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 ZNF766Q5HY98 468 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 STPG4Q8N801 248 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 NPVFQ9HCQ7 196 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 SEPSECSQ9HD40 501 aaKnown RBP11.78□□□□□ -0.52
SRP54-202ENST00000546080 MED12LQ86YW9 2145 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 A0A1W2PS18 150 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 C20orf202A1L168 122 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 FAM90A9PA6NNJ1 464 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 SMPD2O60906 423 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 FOXH1O75593 365 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
SRP54-202ENST00000546080 GNG4P50150 75 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 CX3CL1P78423 397 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 PLGLB1Q02325 96 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 FOXF2Q12947 444 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 HES4Q9HCC6 221 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 LOXL2Q9Y4K0 774 aa11.78□□□□□ -0.52
SRP54-202ENST00000546080 YLPM1P49750 1951 aaKnown RBP11.77□□□□□ -0.52
SRP54-202ENST00000546080 GTF3C1Q12789 2109 aa11.77□□□□□ -0.52
SRP54-202ENST00000546080 K7ESF4 209 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 NDUFB8O95169 186 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 MAGEA5P43359 124 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 GPR12P47775 334 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 CXCL12P48061 93 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 ERVK-16P61578 105 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 GABRA6Q16445 453 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 C3AR1Q16581 482 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 ALKBH6Q3KRA9 238 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 COX19Q49B96 90 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 CXorf67Q86X51 503 aaPredicted RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 ABHD12Q8N2K0 398 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms