RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 TRBV20OR9-2A0A075B6H5 130 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 IGHV3OR15-7A0A075B7D8 119 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 A0A087X0M5 115 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 A0A1B0GX30 115 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 TSTD3H0UI37 97 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 CD99P14209 185 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 COL8A2P25067 703 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 TMPRSS3P57727 454 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 FDCSPQ8NFU4 85 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 GGTLC1Q9BX51 225 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 GNG12Q9UBI6 72 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 DUSP13Q9UII6 198 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 F6UZH7 168 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 F2RL2O00254 374 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 AQP7O14520 342 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 SLC31A2O15432 143 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.39
CNN3-207ENST00000545882 MPDU1O75352 247 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 ARL14EPLP0DKL9 152 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 CCL11P51671 97 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 LCN2P80188 198 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 ZNF664Q8N3J9 261 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 GCSAMQ8N6F7 178 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 OR2Z1Q8NG97 314 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 DDB2Q92466 427 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
CNN3-207ENST00000545882 PLSCR4Q9NRQ2 329 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
CNN3-207ENST00000545882 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
CNN3-207ENST00000545882 SOX15O60248 233 aa12.61□□□□□ -0.39
CNN3-207ENST00000545882 KCNIP4Q6PIL6 250 aa12.61□□□□□ -0.39
CNN3-207ENST00000545882 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
CNN3-207ENST00000545882 PARD6AQ9NPB6 346 aa12.61□□□□□ -0.39
CNN3-207ENST00000545882 ZNF71Q9NQZ8 489 aaPredicted RBP12.61□□□□□ -0.39
CNN3-207ENST00000545882 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 MGST3O14880 152 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 TNFSF13O75888 250 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 FTH1P19P0C7X4 201 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 CGB3P0DN86 165 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 CGB7P0DN87 165 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 TCF19Q9Y242 345 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
CNN3-207ENST00000545882 PRRC2CQ9Y520 2896 aaKnown RBP12.6□□□□□ -0.39
CNN3-207ENST00000545882 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 CGAP01215 116 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 GCGP01275 180 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
CNN3-207ENST00000545882 FOXL1Q12952 345 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 ZNRF1Q8ND25 227 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 SDSLQ96GA7 329 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 IMMP2LQ96T52 175 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 DKK4Q9UBT3 224 aa12.6□□□□□ -0.39
CNN3-207ENST00000545882 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
CNN3-207ENST00000545882 A0A1B0GV90 55 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 A8MWP6 167 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 WT1P19544 449 aaPredicted RBP12.59□□□□□ -0.39
CNN3-207ENST00000545882 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
CNN3-207ENST00000545882 ARSJQ5FYB0 599 aaPredicted RBP12.59□□□□□ -0.39
CNN3-207ENST00000545882 DEFB124Q8NES8 71 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
CNN3-207ENST00000545882 SPENQ96T58 3664 aaKnown RBP12.59□□□□□ -0.39
CNN3-207ENST00000545882 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 CXorf1O96002 111 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 CFHR2P36980 270 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 ERVK-16P61578 105 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 SPATA31B1PQ5VZV4 182 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.39
CNN3-207ENST00000545882 GBGT1Q8N5D6 347 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 LEAP2Q969E1 77 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 SFRP2Q96HF1 295 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 S1PR3Q99500 378 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.39
CNN3-207ENST00000545882 DSPP15924 2871 aaKnown RBP12.58□□□□□ -0.4
CNN3-207ENST00000545882 TRGV8A0A0C4DH27 118 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 A0A1B0GUS0 222 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 IL6RP08887 468 aaPredicted RBP12.58□□□□□ -0.4
CNN3-207ENST00000545882 SSX2Q16385 188 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 SSMEM1Q8WWF3 244 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 WFIKKN1Q96NZ8 548 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 CALYQ9NYX4 217 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 TRAPPC1Q9Y5R8 145 aa12.58□□□□□ -0.4
CNN3-207ENST00000545882 SPAARA0A1B0GVQ0 90 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
CNN3-207ENST00000545882 NUPR1O60356 82 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms