RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CA2P00918 260 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 UNQ5815/PRO19632Q6UWF5 114 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 RPRMQ9NS64 109 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF207O43670 478 aaKnown RBP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 SS18L1O75177 396 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 LEPROTL1O95214 131 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 DDTP30046 118 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 CKS2P33552 79 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 FHITP49789 147 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 IFI27L2Q9H2X8 130 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 MTCL1Q9Y4B5 1905 aaKnown RBP10.61□□□□□ -0.71
COL4A6-209ENST00000545689 IGHV3-72A0A0B4J1Y9 119 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 UMODP07911 640 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 COTL1Q14019 142 aa10.61□□□□□ -0.71
COL4A6-209ENST00000545689 LTBRP36941 435 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF738Q8NE65 137 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 PIMREGQ9BSJ6 248 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-209ENST00000545689 LOC105371242A0A075B767 164 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 RELBQ01201 579 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 CSRP2Q16527 193 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 CECR9P0C854 216 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-209ENST00000545689 ZCCHC14Q8WYQ9 949 aaKnown RBP10.6□□□□□ -0.71
COL4A6-209ENST00000545689 CD40P25942 277 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-209ENST00000545689 SAPCD1Q5SSQ6 148 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 CACNG8Q8WXS5 425 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 ELOVL1Q9BW60 279 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
COL4A6-209ENST00000545689 ZNHIT1O43257 154 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-209ENST00000545689 CLDND2Q8NHS1 167 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 KBTBD11-OT1A0A1B0GTJ5 212 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 IGHV2OR16-5A0A0B4J2B6 119 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 ERASQ7Z444 233 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 OR10S1Q8NGN2 331 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 EEF1AKMT3Q96AZ1 226 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 IL36BQ9NZH7 164 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 LHX2P50458 406 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 BIVMQ86UB2 503 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 ZNF525Q8N782 197 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 RNASEH2CQ8TDP1 164 aaKnown RBP10.59□□□□□ -0.71
COL4A6-209ENST00000545689 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 ANK1P16157 1881 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 SRIP30626 198 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 CENPWQ5EE01 88 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 LY6G6FQ5SQ64 297 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 TCF24Q7RTU0 167 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
COL4A6-209ENST00000545689 ANOS1P23352 680 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 WDYHV1Q96HA8 205 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 J3KRW8 73 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 FGF16O43320 207 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 CELA3AP09093 270 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 HBBP68871 147 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 CFHR1Q03591 330 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 LRTM2Q8N967 370 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 LYZL4Q96KX0 146 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 CHD5Q8TDI0 1954 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 PLAUP00749 431 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 RPL39P5Q59GN2 51 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 FDCSPQ8NFU4 85 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 A0A1B0GW15 77 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 LNP1A1A4G5 178 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
COL4A6-209ENST00000545689 RNFT1Q5M7Z0 435 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 ATP1A1-AS1Q5TC04 95 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 GFI1Q99684 422 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 GPR61Q9BZJ8 451 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 TMEM106BQ9NUM4 274 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 TMEM190Q8WZ59 177 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 LINC00312Q9Y6C7 94 aa10.58□□□□□ -0.72
COL4A6-209ENST00000545689 HLA-DRB1P01911 266 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
COL4A6-209ENST00000545689 TM4SF20Q53R12 229 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 OR4A47Q6IF82 309 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 WBP1Q96G27 269 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 A0A0G2JMM0 328 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 A0A1W2PPB8 328 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 A0A1W2PRS3 328 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 KIR3DP1A8MWS1 328 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 IGHV1-2P23083 117 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 FXYD3Q14802 87 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 LEAP2Q969E1 77 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 C17orf98A8MV24 154 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 TNFSF10P50591 281 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 FAM106AQ4KMX7 169 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 VKORC1L1Q8N0U8 176 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms