RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GPR137BO60478 399 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF737O75373 536 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 LSM8O95777 96 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 IGHA1P01876 353 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 VDAC1P21796 283 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 MTPNP58546 118 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 C1orf61Q13536 156 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 KLF17Q5JT82 389 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 RPL7L1Q6DKI1 246 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF534Q76KX8 674 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 FAM90A1Q86YD7 464 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 TDHQ8IZJ6 230 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 C3orf22Q8N5N4 141 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 RASL10AQ92737 203 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 LINC00526Q96FQ7 95 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 MCEEQ96PE7 176 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 JPT2Q9H910 190 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 PLAC1Q9HBJ0 212 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 CMC2Q9NRP2 79 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 OR2W1Q9Y3N9 320 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 CASP8AP2Q9UKL3 1982 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF646O15015 1829 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 TMED7-TICAM2A0A0A6YYA0 188 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 EEF1E1-BLOC1S5C9J1V9 151 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 OVOL1O14753 267 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 TM4SF5O14894 197 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 FGF10O15520 208 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF324O75467 553 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 IGHG1P01857 330 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 CD3EP07766 207 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 MYOD1P15172 320 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 CR2P20023 1033 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 PPP1CBP62140 327 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 HERVK_113P63121 156 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 FUT5Q11128 374 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF260Q3ZCT1 412 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 IBA57Q5T440 356 aaKnown RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 PARM1Q6UWI2 310 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 RNF144BQ7Z419 303 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 ATOH7Q8N100 152 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM256Q8N2U0 113 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 WDR31Q8NA23 367 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 LSM10Q969L4 123 aaKnown RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 C2orf50Q96LR7 162 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 MRPL20Q9BYC9 149 aaKnown RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM222Q9H0R3 208 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 RNASE7Q9H1E1 156 aaKnown RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 PELI2Q9HAT8 420 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 EDA2RQ9HAV5 297 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 FBXL7Q9UJT9 491 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 KLF12Q9Y4X4 402 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 DNAJC15Q9Y5T4 150 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 CHCHD2Q9Y6H1 151 aaPredicted RBP4.29□□□□□ -1.72
UBE4A-203ENST00000545354 CENPFP49454 3210 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 LAMB2P55268 1798 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 HTTP42858 3142 aa4.29□□□□□ -1.72
UBE4A-203ENST00000545354 CCL15-CCL14A0A0B4J2E2 113 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 M0R2P5 195 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 SLC17A2O00624 439 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 RRHO14718 337 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 TNFSF12O43508 249 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 NDUFB4O95168 129 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 SBK3P0C264 359 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF688P0C7X2 276 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 SP9P0CG40 484 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 BCL2P10415 239 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ACRV1P26436 265 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 CX3CL1P78423 397 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 PLGLB1Q02325 96 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ICAM4Q14773 271 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 CD226Q15762 336 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 IGFBP7Q16270 282 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 CSRP2Q16527 193 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF678Q5SXM1 525 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 C1orf220Q5T0J3 134 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 HES3Q5TGS1 186 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 NUP210LQ5VU65 1888 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 Q6ZSR3 168 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 FAM57BQ71RH2 274 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF550Q7Z398 422 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF808Q8N4W9 903 aaPredicted RBP4.28□□□□□ -1.72
UBE4A-203ENST00000545354 DTWD2Q8NBA8 298 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 NUP35Q8NFH5 326 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 OTOSQ8NHW6 89 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 DDB2Q92466 427 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 SLC25A38Q96DW6 304 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 DEFB118Q96PH6 123 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 PDCD1LG2Q9BQ51 273 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 TM2D1Q9BX74 207 aa4.28□□□□□ -1.72
UBE4A-203ENST00000545354 PRDM14Q9GZV8 571 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms