RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SNX29P2Q8IUI4 249 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 CLVS1Q8IUQ0 354 aaPredicted RBP5.74□□□□□ -1.49
CPSF7-224ENST00000544990 OR5H2Q8NGV7 314 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 OR6F1Q8NGZ6 308 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 OR4S2Q8NH73 311 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 GRPEL2Q8TAA5 225 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 VSTM2AQ8TAG5 236 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 RAB2BQ8WUD1 216 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 C15orf40Q8WUR7 153 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 DPF1Q92782 380 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 SNAPC3Q92966 411 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 P2RX4Q99571 388 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 BCL7BQ9BQE9 202 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 FAM103A1Q9BTL3 118 aaKnown RBP5.74□□□□□ -1.49
CPSF7-224ENST00000544990 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 SLC5A7Q9GZV3 580 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 KLK15Q9H2R5 256 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 SLA2Q9H6Q3 261 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 SCPEP1Q9HB40 452 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 CCL28Q9NRJ3 127 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF355PQ9NSJ1 428 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 TAS2R8Q9NYW2 309 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
CPSF7-224ENST00000544990 FBXO7Q9Y3I1 522 aa5.74□□□□□ -1.49
CPSF7-224ENST00000544990 H3BUA1 57 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 ARPC1BO15143 372 aaKnown RBP5.73□□□□□ -1.49
CPSF7-224ENST00000544990 TPPPO94811 219 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 HRASP01112 189 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 IGLV2-14P01704 120 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 PMP2P02689 132 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 OR8U8P0C7N1 319 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 RPL5P46777 297 aaKnown RBP5.73□□□□□ -1.49
CPSF7-224ENST00000544990 RFX2P48378 723 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 TMBIM6P55061 237 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 TSPAN5P62079 268 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 RPL30P62888 115 aaKnown RBP5.73□□□□□ -1.49
CPSF7-224ENST00000544990 RUNX1Q01196 453 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 PJVKQ0ZLH3 352 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 DYRK1AQ13627 763 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 TNXAQ16473 311 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 OR2B11Q5JQS5 317 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 MMD2Q8IY49 270 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 POC5Q8NA72 575 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 OR11H1Q8NG94 326 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 MYOZ3Q8TDC0 251 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 GPX8Q8TED1 209 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 DUX3Q96PT4 197 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 PHB2Q99623 299 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF2Q9BSG1 426 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-224ENST00000544990 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 EXTL2Q9UBQ6 330 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
CPSF7-224ENST00000544990 VWFP04275 2813 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 A0A0G2JLM5 398 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 MSGN1A6NI15 193 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 I3L521 148 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 MPPED1O15442 326 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 RGS5O15539 181 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 RBFOX2O43251 390 aaKnown RBP eCLIP5.72□□□□□ -1.49
CPSF7-224ENST00000544990 TNFSF12O43508 249 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 SOX15O60248 233 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 OR2A4O95047 310 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 HPRT1P00492 218 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 TRGV3P03979 118 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 SAA1P0DJI8 122 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-224ENST00000544990 HLA-DMAP28067 261 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 S100GP29377 79 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 RCVRNP35243 200 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 HRH1P35367 487 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 MAS1LP35410 378 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 TPPP2P59282 170 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF616Q08AN1 781 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 EIF4EBP1Q13541 118 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-224ENST00000544990 KIAA0141Q14154 515 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-224ENST00000544990 PRSS8Q16651 343 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 DEFB136Q30KP8 78 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 LPCAT3Q6P1A2 487 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 IDO2Q6ZQW0 420 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 ZNF818PQ6ZRF7 136 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 TMEM17Q86X19 198 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 CMTM1Q8IZ96 169 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 SPAG16Q8N0X2 631 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 OR5T1Q8NG75 326 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 OR1N2Q8NGR9 330 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 CD300LFQ8TDQ1 290 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 MOB3AQ96BX8 217 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 MS4A10Q96PG2 267 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 OR5B12Q96R08 314 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 OR2A7Q96R45 310 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 GNB4Q9HAV0 340 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 NOTCH3Q9UM47 2321 aa5.72□□□□□ -1.49
CPSF7-224ENST00000544990 C13orf42A0A1B0GVH6 325 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 GPR31O00270 319 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 KBTBD11O94819 623 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 IFNA6P05013 189 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 LGALS1P09382 135 aaKnown RBP5.71□□□□□ -1.5
CPSF7-224ENST00000544990 NQO2P16083 231 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 GNRHRP30968 328 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 TAS2R31P59538 309 aa5.71□□□□□ -1.5
CPSF7-224ENST00000544990 MRPS10P82664 201 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms