RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 NEIL1Q96FI4 390 aaPredicted RBP14.57□□□□□ -0.08
SCARB1-208ENST00000544327 PARLQ9H300 379 aa14.57□□□□□ -0.08
SCARB1-208ENST00000544327 RPUSD1Q9UJJ7 312 aaKnown RBP14.57□□□□□ -0.08
SCARB1-208ENST00000544327 DOCK11Q5JSL3 2073 aa14.57□□□□□ -0.08
SCARB1-208ENST00000544327 EP300Q09472 2414 aaPredicted RBP14.56□□□□□ -0.08
SCARB1-208ENST00000544327 TTC28Q96AY4 2481 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 PRRG2O14669 202 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 GYPAP02724 150 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 HSPE1P61604 102 aaKnown RBP14.56□□□□□ -0.08
SCARB1-208ENST00000544327 RPL23P62829 140 aaKnown RBP14.56□□□□□ -0.08
SCARB1-208ENST00000544327 SLC25A48Q6ZT89 311 aaKnown RBP14.56□□□□□ -0.08
SCARB1-208ENST00000544327 OR4F5Q8NH21 305 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 GATAD1Q8WUU5 269 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 RHOVQ96L33 236 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 OR4F4Q96R69 305 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 MS4A5Q9H3V2 200 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 KCNIP2Q9NS61 270 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 JKAMPQ9P055 326 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
SCARB1-208ENST00000544327 LSM4Q9Y4Z0 139 aaKnown RBP14.56□□□□□ -0.08
SCARB1-208ENST00000544327 YIF1AO95070 293 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 HRASP01112 189 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 TNFRSF1AP19438 455 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 BSXQ3C1V8 233 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 LYG1Q8N1E2 194 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 FAM216BQ8N7L0 139 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 MGST2Q99735 147 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 PYGO2Q9BRQ0 406 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 GGTLC1Q9BX51 225 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 LINC00312Q9Y6C7 94 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 TET2Q6N021 2002 aaPredicted RBP14.55□□□□□ -0.08
SCARB1-208ENST00000544327 hADV38S2A0JD32 116 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 NKX6-3A6NJ46 265 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 FNDC10F2Z333 226 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 PAGE4O60829 102 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 CLN5O75503 358 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 VENTXO95231 258 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 ABHD12Q8N2K0 398 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 DEFB108BQ8NET1 73 aa14.55□□□□□ -0.08
SCARB1-208ENST00000544327 ZCCHC14Q8WYQ9 949 aaKnown RBP14.55□□□□□ -0.08
SCARB1-208ENST00000544327 RPUSD4Q96CM3 377 aaKnown RBP14.55□□□□□ -0.08
SCARB1-208ENST00000544327 LOC400499M0QZD8 3231 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 DPRXA6NFQ7 191 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 C17orf100A8MU93 164 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 CDX1P47902 265 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-208ENST00000544327 MEF2CQ06413 473 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-208ENST00000544327 ADIRFQ15847 76 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 ADIPOQQ15848 244 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 SSX3Q99909 188 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 TXNDC17Q9BRA2 123 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 NPVFQ9HCQ7 196 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 DOK5Q9P104 306 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 PRNDQ9UKY0 176 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 ZNF835Q9Y2P0 537 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 ZNF257Q9Y2Q1 563 aa14.54□□□□□ -0.08
SCARB1-208ENST00000544327 SVILO95425 2214 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 PHOX2AO14813 284 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 PDE6DO43924 150 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BKO60814 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 TRGC2P03986 189 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BJP06899 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 PFN1P07737 140 aaKnown RBP14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BOP23527 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 NPY1RP25929 384 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BBP33778 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BDP58876 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BCP62807 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST2H2BEQ16778 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.53□□□□□ -0.08
SCARB1-208ENST00000544327 C16orf82Q7Z2V1 217 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 SLC24A4Q8NFF2 622 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BHQ93079 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 C1orf159Q96HA4 380 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BNQ99877 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 HIST1H2BMQ99879 126 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 PXMP4Q9Y6I8 212 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 DYSFO75923 2080 aa14.53□□□□□ -0.08
SCARB1-208ENST00000544327 A0A1W2PPV4 95 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 C11orf94C9JXX5 98 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 MMP23AO75900 390 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 THBDP07204 575 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 ANAPC16Q96DE5 110 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 ABHD17AQ96GS6 310 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 CADP27708 2225 aa14.52□□□□□ -0.08
SCARB1-208ENST00000544327 TRAV38-1A0A0B4J264 116 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 F6UZH7 168 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 UPK2O00526 184 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 OR4A8P0C604 315 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 STAG3L2P0CL84 134 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 STAG3L3P0CL85 134 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 CT45A6P0DMU7 189 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 CT45A5P0DMU8 189 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 CT45A7P0DMV0 189 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 ATP5IP56385 69 aaPredicted RBP14.52□□□□□ -0.09
SCARB1-208ENST00000544327 GCSAMLQ5JQS6 135 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 NCMAPQ5T1S8 102 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 SLC16A13Q7RTY0 426 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 WFDC8Q8IUA0 241 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 TGIF2LYQ8IUE0 185 aa14.52□□□□□ -0.09
SCARB1-208ENST00000544327 Q8NA96 180 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms