RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TRGV3P03979 118 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TSPAN7P41732 249 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 FAM27BQ5VT28 67 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 CYB5R2Q6BCY4 276 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 CYP2G1PQ6ZSU1 146 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 OR4D11Q8NGI4 311 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 A0A1B0GW15 77 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 CISD3P0C7P0 127 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 LINC00614P0C842 121 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 FAM71F2Q6NXP2 309 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TRGV2A0A075B6R0 118 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 UPK3AO75631 287 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 ST6GALNAC6Q969X2 333 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 FMC1Q96HJ9 113 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 SMIM8Q96KF7 97 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 VGLL1Q99990 258 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 ANKRD12Q6UB98 2062 aa8.91□□□□□ -0.98
PCDH9-204ENST00000544246 A0A1B0GUL6 1792 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 PGPEP1LA6NFU8 196 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 MARCH11A6NNE9 402 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 CRPP02741 224 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 CBLN1P23435 193 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 ICAM4Q14773 271 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 PRSS53Q2L4Q9 553 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 PEAR1Q5VY43 1037 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-204ENST00000544246 ZNF562Q6V9R5 426 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 OR11H4Q8NGC9 324 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 COX14Q96I36 57 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 PRDM6Q9NQX0 595 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 IGHV3-66A0A0C4DH42 116 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 LOC390937A0A1W2PQ73 354 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 ATXN7O15265 892 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-204ENST00000544246 MOSP00540 346 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 IGFBP6P24592 240 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-204ENST00000544246 OR10J3Q5JRS4 329 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM91Q6ZNR0 172 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 MRPL20Q9BYC9 149 aaKnown RBP8.9□□□□□ -0.98
PCDH9-204ENST00000544246 KLHDC2Q9Y2U9 406 aa8.9□□□□□ -0.98
PCDH9-204ENST00000544246 ODAMA1E959 279 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 GGTLC3B5MD39 225 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 NDUFS8O00217 210 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3-23P01764 117 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 LEPP41159 167 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 P2RY4P51582 365 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 SRSF4Q08170 494 aaKnown RBP8.9□□□□□ -0.99
PCDH9-204ENST00000544246 FAM214BQ7L5A3 538 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 PKIBQ9C010 78 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 G6PC2Q9NQR9 355 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 GPR132Q9UNW8 380 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 PRR32B1ATL7 298 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 CD8AP01732 235 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 IRF3Q14653 427 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 RBM38Q9H0Z9 239 aaKnown RBP8.9□□□□□ -0.99
PCDH9-204ENST00000544246 TMEM30AQ9NV96 361 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 IL36BQ9NZH7 164 aa8.9□□□□□ -0.99
PCDH9-204ENST00000544246 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF729A6NN14 1252 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 H3BUT2 72 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 SIGLEC5O15389 551 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF79Q15937 498 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF660Q6AZW8 331 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 C9orf40Q8IXQ3 194 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 RNF182Q8N6D2 247 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 NPIPB3Q92617 1050 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ATP5J2P56134 94 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF826PQ6ZT77 177 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 SSC4DQ8WTU2 575 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 VENTXO95231 258 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 NMBP08949 121 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 LINC00518Q8N0U6 118 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 PNKDQ8N490 385 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 TCF19Q9Y242 345 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 PRR33A8MZF0 331 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 HRKO00198 91 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ZIC3O60481 467 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 TBR1Q16650 682 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 WDYHV1Q96HA8 205 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 SMAD7O15105 426 aaKnown RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 HOXA3O43365 443 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-204ENST00000544246 TMEM249Q2WGJ8 235 aa8.89□□□□□ -0.99
PCDH9-204ENST00000544246 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-204ENST00000544246 LRTM2Q8N967 370 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 SMRP1Q8NCR6 262 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF721Q8TF20 911 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
PCDH9-204ENST00000544246 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 FOXH1O75593 365 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 IL6RP08887 468 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-204ENST00000544246 DANCRP0C864 163 aa8.88□□□□□ -0.99
PCDH9-204ENST00000544246 TMPRSS3P57727 454 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms