RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CT45A7P0DMV0 189 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 SFTPCP11686 197 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 CDSNQ15517 529 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 VWC2Q2TAL6 325 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 SLC35D1Q9NTN3 355 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 ROS1P08922 2347 aa13.98□□□□□ -0.17
PTPRO-209ENST00000543886 ADGRG4Q8IZF6 3080 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 OR13C7P0DN81 318 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 SP5Q6BEB4 398 aaPredicted RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ZNF787Q6DD87 383 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ZNF833PQ6ZTB9 187 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 TCF19Q9Y242 345 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 FOXA2Q9Y261 457 aaPredicted RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ATRXP46100 2492 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 DOCK11Q5JSL3 2073 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 C1orf196B1AJZ1 125 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 VDAC2P45880 294 aaPredicted RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 HNF4GQ14541 408 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 POU2AF1Q16633 256 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 CENPVQ7Z7K6 275 aaPredicted RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ZFP82Q8N141 532 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ZNF709Q8N972 641 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 OR13D1Q8NGV5 346 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 CLDND2Q8NHS1 167 aa13.97□□□□□ -0.17
PTPRO-209ENST00000543886 RCC1LQ96I51 464 aaKnown RBP13.97□□□□□ -0.17
PTPRO-209ENST00000543886 ARFGEF3Q5TH69 2177 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 S100A8P05109 93 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 TFF3Q07654 80 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 LY6DQ14210 128 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 AKIRIN2Q53H80 203 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 ZNF506Q5JVG8 444 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 LCN15Q6UWW0 184 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 UNQ6494/PRO21346Q6UXR6 183 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 ENY2Q9NPA8 101 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 TMEM14BQ9NUH8 114 aa13.96□□□□□ -0.17
PTPRO-209ENST00000543886 PKDREJQ9NTG1 2253 aa13.96□□□□□ -0.18
PTPRO-209ENST00000543886 APOA2P02652 100 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 ZNF726P1Q15940 193 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 RNF212Q495C1 297 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 OR10X1Q8NGY0 326 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 NPCDR1Q9BY65 106 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 PRORYQ9H606 182 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 UNKLQ9H9P5 680 aaKnown RBP13.95□□□□□ -0.18
PTPRO-209ENST00000543886 C17orf112F2Z3M2 114 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 M0R036 132 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 MBP02144 154 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 SMIM6P0DI80 62 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 HABP2Q14520 560 aaPredicted RBP13.95□□□□□ -0.18
PTPRO-209ENST00000543886 ICAM4Q14773 271 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
PTPRO-209ENST00000543886 GNG13Q9P2W3 67 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 PRNDQ9UKY0 176 aa13.95□□□□□ -0.18
PTPRO-209ENST00000543886 NBEAQ8NFP9 2946 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 EIF3GO75821 320 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTPRO-209ENST00000543886 IGKV1-16P04430 117 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 HSPB1P04792 205 aaKnown RBP13.94□□□□□ -0.18
PTPRO-209ENST00000543886 S100A9P06702 114 aaKnown RBP13.94□□□□□ -0.18
PTPRO-209ENST00000543886 PPOXP50336 477 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 HSPE1P61604 102 aaKnown RBP13.94□□□□□ -0.18
PTPRO-209ENST00000543886 RAB11AP62491 216 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 TMEM155Q4W5P6 130 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 ETV3LQ6ZN32 361 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 TMEM204Q9BSN7 226 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 TRBV23-1A0A0A0MS06 115 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 MAP1LC3B2A6NCE7 125 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 LYNX1G3V0Z9 82 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 S100A6P06703 90 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 LYNX1P0DP58 116 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 CD1BP29016 333 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 KHDC3LQ587J8 217 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 AWAT1Q58HT5 328 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 SSX7Q7RTT5 188 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 C8orf31Q8N9H6 132 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 MAP1LC3BQ9GZQ8 125 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 OR51B2Q9Y5P1 312 aa13.94□□□□□ -0.18
PTPRO-209ENST00000543886 LOC102723971A0A1B0GUV8 181 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 SMCO3A2RU48 225 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 J3QR06 171 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 RRHO14718 337 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 MT-ND4LP03901 98 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 SRP19P09132 144 aaKnown RBP13.93□□□□□ -0.18
PTPRO-209ENST00000543886 COL8A2P25067 703 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 CEBPGP53567 150 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 FGF8P55075 233 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-209ENST00000543886 DLX6P56179 175 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 ABHD12Q8N2K0 398 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 RPS10P5Q9NQ39 176 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 SLC39A9Q9NUM3 307 aa13.93□□□□□ -0.18
PTPRO-209ENST00000543886 TET2Q6N021 2002 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-209ENST00000543886 MDKP21741 143 aaPredicted RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 FAM71F2Q6NXP2 309 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 LINC00311Q8N616 119 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 OSR1Q8TAX0 266 aaPredicted RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 HIST1H2BAQ96A08 127 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms