RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	NHLH2	Q02577	135 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	UNC119	Q13432	240 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	GAMT	Q14353	236 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	JOSD1	Q15040	202 aa	Predicted RBP	5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ELOB	Q15370	118 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	UBE2V2	Q15819	145 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST2H2BE	Q16778	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ANKRD55	Q3KP44	614 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CEACAM21	Q3KPI0	293 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	LINC01559	Q495D7	138 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	KHDC3L	Q587J8	217 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CRIP3	Q6Q6R5	217 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	VMO1	Q7Z5L0	202 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	FAM219A	Q8IW50	185 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ZDHHC23	Q8IYP9	409 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	C11orf42	Q8N5U0	333 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ARL6IP6	Q8N6S5	226 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	OR4D6	Q8NGJ1	314 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	OR10D4P	Q8NGN7	298 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	OR4K15	Q8NH41	348 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	NPRL2	Q8WTW4	380 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	SSMEM1	Q8WWF3	244 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	MAFIP	Q8WZ33	124 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	DYRK2	Q92630	601 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BH	Q93079	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	R3HDM4	Q96D70	268 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	SDSL	Q96GA7	329 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	PGAM5	Q96HS1	289 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CCL13	Q99616	98 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BN	Q99877	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BM	Q99879	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.19	□□□□□ -1.58
CIT-213	ENST00000543324	METTL9	Q9H1A3	318 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CNTD2	Q9H8S5	307 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	TMEM242	Q9NWH2	141 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	NSG2	Q9Y328	171 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324		V9GYS6	101 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	LOC107986453	A0A1B0GWG9	222 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	OR5B21	A6NL26	309 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324		A8MWP6	167 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324		M0R1W7	72 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PHOX2A	O14813	284 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	TCAP	O15273	167 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	DHRS3	O75911	302 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	LY86	O95711	162 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GCG	P01275	180 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	IGHV4-59	P01825	116 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PMP2	P02689	132 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	TFF1	P04155	84 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	HSPB1	P04792	205 aa	Known RBP	5.18	□□□□□ -1.58
CIT-213	ENST00000543324	ARG1	P05089	322 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	CSN2	P05814	226 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	OR5AC1	P0C628	307 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PGA5	P0DJD9	388 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PSG2	P11465	335 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GABRR1	P24046	479 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GNAL	P38405	381 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GLIPR1	P48060	266 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	CAMLG	P49069	296 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GPM6A	P51674	278 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	TAS2R46	P59540	309 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	ERVK11-1	P61568	191 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	ARF6	P62330	175 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GNG3	P63215	75 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	DLK1	P80370	383 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	IL13RA2	Q14627	380 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	ARL6IP1	Q15041	203 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	AKIRIN2	Q53H80	203 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	ANKRD39	Q53RE8	183 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	COA6	Q5JTJ3	125 aa	Known RBP	5.18	□□□□□ -1.58
CIT-213	ENST00000543324	SOHLH1	Q5JUK2	328 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	AADACL3	Q5VUY0	350 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	CDPF1	Q6NVV7	123 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	SLC35E3	Q7Z769	313 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	GVQW1	Q8N7I0	195 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	LRTM2	Q8N967	370 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	SUMF2	Q8NBJ7	301 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	HSD17B11	Q8NBQ5	300 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	OR5A2	Q8NGI9	324 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	OR13C3	Q8NGS6	347 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	OR51E1	Q8TCB6	317 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	LHX4	Q969G2	390 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	TVP23C	Q96ET8	276 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	MISP3	Q96FF7	219 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	RHOV	Q96L33	236 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	EIF5A2	Q9GZV4	153 aa	Known RBP	5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PBOV1	Q9GZY1	135 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	LPAR5	Q9H1C0	372 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	C16orf95	Q9H693	158 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	METTL8	Q9H825	291 aa	Known RBP	5.18	□□□□□ -1.58
CIT-213	ENST00000543324	MOB1A	Q9H8S9	216 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	KIAA1456	Q9P272	454 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	PITPNC1	Q9UKF7	332 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	SLC22A13	Q9Y226	551 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	CBY1	Q9Y3M2	126 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	VPS13D	Q5THJ4	4388 aa		5.18	□□□□□ -1.58
CIT-213	ENST00000543324	DNAH2	Q9P225	4427 aa		5.17	□□□□□ -1.58
CIT-213	ENST00000543324	TRBV24-1	A0A075B6N3	115 aa		5.17	□□□□□ -1.58
CIT-213	ENST00000543324	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms