RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SLA2Q9H6Q3 261 aa7.55□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SCPEP1Q9HB40 452 aa7.55□□□□□ -1.2
TNFRSF1A-214ENST00000543048 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 H3BUA1 57 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 K7EIL1 84 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 TRGV3P03979 118 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 AADACP22760 399 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 PRSS3P35030 304 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 INPP1P49441 399 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 DEFA1P59665 94 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 DEFA3P59666 94 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 RPL30P62888 115 aaKnown RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SSBP2P81877 361 aaPredicted RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 IFITM3Q01628 133 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SSBP1Q04837 148 aaKnown RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 EIF4EBP1Q13541 118 aaPredicted RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 CDK10Q15131 360 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MSMO1Q15800 293 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 BAK1Q16611 211 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 PRSS8Q16651 343 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MRGPRG-AS1Q2M3A8 158 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 RNASE12Q5GAN4 147 aaKnown RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 C9orf66Q5T8R8 295 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 KCTD9Q7L273 389 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 LYSMD2Q8IV50 215 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 ZBTB34Q8NCN2 500 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 OR52I2Q8NH67 350 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 CASTOR1Q8WTX7 329 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SECTM1Q8WVN6 248 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 THAP7Q9BT49 309 aaPredicted RBP7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 IFT46Q9NQC8 304 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 CCL28Q9NRJ3 127 aa7.54□□□□□ -1.2
TNFRSF1A-214ENST00000543048 A0A0G2JLM5 398 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 WI2-2373I1.2A0A1W2PRP0 233 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MEIS3P1A6NDR6 274 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 LINC01619G3V211 115 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 RAMP3O60896 148 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 BRI3O95415 125 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 PPYP01298 95 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 HSPB1P04792 205 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 FCER2P06734 321 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 NAT1P18440 290 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 TPPP2P59282 170 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 AP3S2P59780 193 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 DHRS11Q6UWP2 260 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 OVCH2Q7RTZ1 564 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 POC5Q8NA72 575 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 GPX8Q8TED1 209 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 TCTEX1D2Q8WW35 142 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 DCUN1D4Q92564 292 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SNAPC3Q92966 411 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 PHB2Q99623 299 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 SLC5A7Q9GZV3 580 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 MTFP1Q9UDX5 166 aa7.53□□□□□ -1.2
TNFRSF1A-214ENST00000543048 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 C13orf42A0A1B0GVH6 325 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OVOL1O14753 267 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 CREBL2O60519 120 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ACTL6BO94805 426 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OR2A4O95047 310 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 HRASP01112 189 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 IGHV3-11P01762 117 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 RCVRNP35243 200 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 KIR2DS2P43631 304 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 RFX2P48378 723 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 INSL3P51460 131 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 BRWD1-AS2P59051 145 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ASAH1Q13510 395 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 DYRK1AQ13627 763 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 TNXAQ16473 311 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 RGS21Q2M5E4 152 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OR2B11Q5JQS5 317 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ASPHD1Q5U4P2 390 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ZNF57Q68EA5 555 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 IDO2Q6ZQW0 420 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 TOMM5Q8N4H5 51 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OR4S2Q8NH73 311 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 VSTM2AQ8TAG5 236 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OR2A7Q96R45 310 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ZNF430Q9H8G1 570 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 TAS2R8Q9NYW2 309 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 TBC1D24Q9ULP9 559 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 ANAPC10Q9UM13 185 aa7.52□□□□□ -1.21
TNFRSF1A-214ENST00000543048 MPPED1O15442 326 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 TNFSF12O43508 249 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 PTTG1O95997 202 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 PMP2P02689 132 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 OR9G9P0C7N8 305 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 SAA1P0DJI8 122 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 MAS1LP35410 378 aa7.51□□□□□ -1.21
TNFRSF1A-214ENST00000543048 SLURP1P55000 103 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms