RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 RPSAP08865 295 aaKnown RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 GSTT2P0CG29 244 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 GSTT2BP0CG30 244 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 GTF2F2P13984 249 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ZNF19P17023 458 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 CEACAM6P40199 344 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 SOX2P48431 317 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 CRISP1P54107 249 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ELLP55199 621 aaPredicted RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 PTGES3Q15185 160 aaKnown RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 MPV17LQ2QL34 196 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 RNF212Q495C1 297 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 IGSF11Q5DX21 431 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 AMIGO2Q86SJ2 522 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 TBC1D26Q86UD7 250 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ZNF383Q8NA42 475 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 OR51A2Q8NGJ7 313 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 GIMAP1Q8WWP7 306 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 SRSF12Q8WXF0 261 aaKnown RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 MARC2Q969Z3 335 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 EEF1AKMT3Q96AZ1 226 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 CPNE2Q96FN4 548 aaPredicted RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ATP6V1G3Q96LB4 118 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 HARBI1Q96MB7 349 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 SRSF8Q9BRL6 282 aaKnown RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ATG101Q9BSB4 218 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 THTPAQ9BU02 230 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 C20orf24Q9BUV8 137 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 BANF2Q9H503 90 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 CHMP1AQ9HD42 196 aaPredicted RBP3.42□□□□□ -1.86
LIMS1-214ENST00000542845 FGFR1OP2Q9NVK5 253 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 TAS2R4Q9NYW5 299 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 UFC1Q9Y3C8 167 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
LIMS1-214ENST00000542845 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 A0A1B0GW64 132 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 DAPL1A0PJW8 107 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 A8MWP6 167 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 M0R1X1 148 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 GPX5O75715 221 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 IGLV2-23P01705 113 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 CD74P04233 296 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 C8orf88P0DMB2 117 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 HSD17B1P14061 328 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 MIFP14174 115 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 MYOD1P15172 320 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 GABRB1P18505 474 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 ZNF93P35789 620 aaPredicted RBP3.41□□□□□ -1.86
LIMS1-214ENST00000542845 EMP1P54849 157 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 XGP55808 180 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 ZNF85Q03923 595 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 CBX3Q13185 183 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 FAM98BQ52LJ0 330 aaKnown RBP3.41□□□□□ -1.86
LIMS1-214ENST00000542845 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 AADACL4Q5VUY2 407 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 NXNL2Q5VZ03 156 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 LEMD1Q68G75 181 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 CGB2Q6NT52 195 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 FAM71F2Q6NXP2 309 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 PLET1Q6UQ28 207 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 SSX9Q7RTT3 188 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 PDPNQ86YL7 162 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 GID4Q8IVV7 300 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 TTC9CQ8N5M4 171 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 TMEM163Q8TC26 289 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 MRPL30Q8TCC3 161 aaKnown RBP3.41□□□□□ -1.86
LIMS1-214ENST00000542845 SULT4A1Q9BR01 284 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
LIMS1-214ENST00000542845 SELENOIQ9C0D9 397 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 RNF167Q9H6Y7 350 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 SPACA1Q9HBV2 294 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 PAK1IP1Q9NWT1 392 aaPredicted RBP3.41□□□□□ -1.86
LIMS1-214ENST00000542845 LRRC42Q9Y546 428 aa3.41□□□□□ -1.86
LIMS1-214ENST00000542845 DNAH5Q8TE73 4624 aa3.4□□□□□ -1.86
LIMS1-214ENST00000542845 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 NBDYA0A0U1RRE5 68 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 OR4C45A6NMZ5 311 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 C15orf61A6NNL5 157 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 SRRM4A7MD48 611 aaKnown RBP3.4□□□□□ -1.87
LIMS1-214ENST00000542845 CCDC22O60826 627 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 PROP1O75360 226 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 CRTAPO75718 401 aaPredicted RBP3.4□□□□□ -1.87
LIMS1-214ENST00000542845 FAM107AO95990 144 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 REG1AP05451 166 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 CRYGBP07316 175 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 DEFA4P12838 97 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 ANXA8P13928 327 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 ZNF182P17025 639 aaPredicted RBP3.4□□□□□ -1.87
LIMS1-214ENST00000542845 FUT3P21217 361 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 GPR183P32249 361 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 PPP5CP53041 499 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
LIMS1-214ENST00000542845 HAMPP81172 84 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 PLA2G7Q13093 441 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 GK3PQ14409 553 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 PRSS8Q16651 343 aa3.4□□□□□ -1.87
LIMS1-214ENST00000542845 VMA21Q3ZAQ7 101 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms