RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	NECAP1	Q8NC96	275 aa		12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	DYNLRB2	Q8TF09	96 aa		12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	KCTD12	Q96CX2	325 aa	Known RBP	12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	HIPK2	Q9H2X6	1198 aa		12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	OR2W1	Q9Y3N9	320 aa		12.14	□□□□□ -0.47
DDX11-222	ENST00000542777	HMX3	A6NHT5	357 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	NOTO	A8MTQ0	251 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	SLC22A5	O76082	557 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	HLA-DQB1	P01920	261 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	CD7	P09564	240 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	CTXN2	P0C2S0	81 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	NFYA	P23511	347 aa	Predicted RBP	12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	DEFB114	Q30KQ6	69 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	C15orf32	Q32M92	178 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	OR2B11	Q5JQS5	317 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	SFXN4	Q6P4A7	337 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	TPRA1	Q86W33	373 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	LAX1	Q8IWV1	398 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	OR5H6	Q8NGV6	325 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	SLC2A8	Q9NY64	477 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	DAPK2	Q9UIK4	370 aa		12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	MRPS7	Q9Y2R9	242 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	RBMX2	Q9Y388	322 aa	Known RBP	12.13	□□□□□ -0.47
DDX11-222	ENST00000542777	PPP5D1	E7EU14	171 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	SPCS2	Q15005	226 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	FAM209B	Q5JX69	171 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	HACD4	Q5VWC8	232 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	VKORC1L1	Q8N0U8	176 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	DEFB125	Q8N687	156 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	LGALS14	Q8TCE9	139 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	FAM110A	Q9BQ89	295 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	DCSTAMP	Q9H295	470 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	ZNF257	Q9Y2Q1	563 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	DMRT1	Q9Y5R6	373 aa		12.12	□□□□□ -0.47
DDX11-222	ENST00000542777	IGKV1D-13	A0A0B4J2D9	117 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	DPPA5	A6NC42	116 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	C2orf70	A6NJV1	201 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	TEX22	C9J3V5	150 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	GGCT	O75223	188 aa	Known RBP	12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	OR2C1	O95371	312 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	IGLV2-14	P01704	120 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	HLA-A	P01891	365 aa	Known RBP	12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	IGKV1-13	P0DP09	117 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	FOLR2	P14207	255 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	EDN2	P20800	178 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	KIR2DS2	P43631	304 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	GUCA2B	Q16661	112 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	CNIH2	Q6PI25	160 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	IL17D	Q8TAD2	202 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	FYTTD1	Q96QD9	318 aa	Known RBP	12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	OR2A7	Q96R45	310 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	FBXL7	Q9UJT9	491 aa		12.11	□□□□□ -0.47
DDX11-222	ENST00000542777	RBMY1B	A6NDE4	496 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	RBMY1E	A6NEQ0	496 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	OR11H12	B2RN74	326 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777		E7EUB6	86 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	KBTBD11	O94819	623 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	IL6R	P08887	468 aa	Predicted RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	RBMY1D	P0C7P1	496 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	RPL27A	P46776	148 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	IDNK	Q5T6J7	187 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	C19orf35	Q6ZS72	473 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	PUSL1	Q8N0Z8	303 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	OR4S2	Q8NH73	311 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	VSTM2A	Q8TAG5	236 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	NUDCD2	Q8WVJ2	157 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	TCTEX1D2	Q8WW35	142 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	HSD17B10	Q99714	261 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	RBM38	Q9H0Z9	239 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	WFDC10A	Q9H1F0	79 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	SRD5A3	Q9H8P0	318 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	TECR	Q9NZ01	308 aa	Known RBP	12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	SPATA2	Q9UM82	520 aa		12.1	□□□□□ -0.47
DDX11-222	ENST00000542777	EPPK1	P58107	5090 aa	Known RBP	12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	TMEM235	A6NFC5	223 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	NPIPB5	A8MRT5	1133 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	LGALS9	O00182	355 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	JTB	O76095	146 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	NDUFB8	O95169	186 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	IGHV3-23	P01764	117 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	MAS1L	P35410	378 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	GNG2	P59768	71 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	GPHB5	Q86YW7	130 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	MFSD4A	Q8N468	514 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	TMEM167A	Q8TBQ9	72 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	SLC25A38	Q96DW6	304 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	WDR89	Q96FK6	387 aa	Predicted RBP	12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	FANCD2OS	Q96PS1	177 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	ZC4H2	Q9NQZ6	224 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	SLC2A9	Q9NRM0	540 aa		12.09	□□□□□ -0.47
DDX11-222	ENST00000542777	ZNF735	P0CB33	412 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	ARL3	P36405	182 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	BRWD1-AS2	P59051	145 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	CLEC19A	Q6UXS0	136 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	ZNF66	Q6ZN08	573 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	SLC25A46	Q96AG3	418 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	TAS2R8	Q9NYW2	309 aa		12.08	□□□□□ -0.48
DDX11-222	ENST00000542777	ANXA10	Q9UJ72	324 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms