RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 FOXI3A8MTJ6 420 aaPredicted RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 GPR137BO60478 399 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 IGHMP01871 453 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GATA2P23769 480 aaPredicted RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 HRH1P35367 487 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 ZNF93P35789 620 aaPredicted RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 ZNF506Q5JVG8 444 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 OR5D13Q8NGL4 314 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 OR52N5Q8NH56 324 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 RNF128Q8TEB7 428 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 MSI2Q96DH6 328 aaKnown RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 TAS2R4Q9NYW5 299 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 LOC102723996A0A087X1L8 192 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE12JA6NER3 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 TMEM212A6NML5 194 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE7O76087 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE12FP0CL80 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE12GP0CL81 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE12IP0CL82 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 NPBWR2P48146 333 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 TGFBR3Q03167 851 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 GAGE4Q13068 117 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 CATR1Q13166 79 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 ANXA2RQ3ZCQ2 193 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 WIPI1Q5MNZ9 446 aaPredicted RBP9.36□□□□□ -0.91
CDH3-203ENST00000542274 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 PPP1R32Q7Z5V6 425 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 SIGLECL1Q8N7X8 197 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 DDB2Q92466 427 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 CYYR1Q96J86 154 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 IMMP1LQ96LU5 166 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
CDH3-203ENST00000542274 NSG1A0A0A6YYJ2 146 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 SDCBPO00560 298 aaPredicted RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 CGAP01215 116 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 TYMSP04818 313 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZNF823P16415 610 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 NTF3P20783 257 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 TAS2R31P59538 309 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZNF474Q6S9Z5 364 aaPredicted RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZDHHC22Q8N966 263 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 PECRQ9BY49 303 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 WDR61Q9GZS3 305 aaKnown RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 PLEKHF2Q9H8W4 249 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 PROK2Q9HC23 129 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 CYSLTR1Q9Y271 337 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 SLC22A20A6NK97 555 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZNF736B4DX44 427 aaPredicted RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 K7N7A8 449 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZNF253O75346 499 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 ZNF728P0DKX0 622 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 CSRP1P21291 193 aaKnown RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 P2RY1P47900 373 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 RNF144BQ7Z419 303 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 OR2G3Q8NGZ4 309 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 OR2T10Q8NGZ9 312 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 TM2D1Q9BX74 207 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 TAAR3PQ9P1P4 343 aa9.35□□□□□ -0.91
CDH3-203ENST00000542274 URB1O60287 2271 aaKnown RBP9.35□□□□□ -0.91
CDH3-203ENST00000542274 VWC2LB2RUY7 222 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 UCNP55089 124 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 ROM1Q03395 351 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 ALKBH4Q9NXW9 302 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 OR1A1Q9P1Q5 309 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 LOC107986453A0A1B0GWG9 222 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 SRSF10O75494 262 aaKnown RBP9.34□□□□□ -0.91
CDH3-203ENST00000542274 CA1P00915 261 aaPredicted RBP9.34□□□□□ -0.91
CDH3-203ENST00000542274 HLA-HP01893 362 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 KIR2DS4P43632 304 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 DAP3P51398 398 aaKnown RBP9.34□□□□□ -0.91
CDH3-203ENST00000542274 Q0VFX4 171 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 TMEM211Q6ICI0 200 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 PIP4P1Q86T03 277 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 OR10P1Q8NGE3 313 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 DHDHQ9UQ10 334 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 BOD1L1Q8NFC6 3051 aa9.34□□□□□ -0.91
CDH3-203ENST00000542274 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 H3BUT2 72 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 NHLRC4P0CG21 123 aaPredicted RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 TCL1AP56279 114 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 RPL15P61313 204 aaKnown RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 KCTD18Q6PI47 426 aaPredicted RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 SLC25A44Q96H78 314 aaPredicted RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 SPRY4Q9C004 299 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 PXMP4Q9Y6I8 212 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 FAM90A27PA6NNH2 459 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 M0R2Z0 102 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms