RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SLC25A33Q9BSK2 321 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 FBXL15Q9H469 300 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 ESM1Q9NQ30 184 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 COMMD9Q9P000 198 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 NF1P21359 2839 aa7.44□□□□□ -1.22
DDX55-208ENST00000541259 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
DDX55-208ENST00000541259 hCG_2014768A0A024R1R8 64 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 A0A0B4J2A0 478 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 SH2D7A6NKC9 451 aaPredicted RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 MARCH11A6NNE9 402 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 NCBP2LA6PVI3 153 aaKnown RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 FCN1O00602 326 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 CCSO14618 274 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 NBR2O15453 112 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 SSNA1O43805 119 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 CHST1O43916 411 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 SIX6O95475 246 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 HRASP01112 189 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 P0C879 139 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 FAM157CP0CG43 387 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 SAA1P0DJI8 122 aaPredicted RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 MYOD1P15172 320 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 NQO2P16083 231 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 LGALS7P47929 136 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 PJVKQ0ZLH3 352 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 MMDQ15546 238 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 POU2AF1Q16633 256 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 OR4A47Q6IF82 309 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 PUSL1Q8N0Z8 303 aaKnown RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 Q8N9W7 124 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 OR5R1Q8NH85 324 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 SSMEM1Q8WWF3 244 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 IL22RA2Q969J5 263 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 CLCC1Q96S66 551 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 TSNAXQ99598 290 aaKnown RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 RNF5Q99942 180 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 CHIAQ9BZP6 476 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 TMEM140Q9NV12 185 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 METTL1Q9UBP6 276 aaKnown RBP7.43□□□□□ -1.22
DDX55-208ENST00000541259 SHPKQ9UHJ6 478 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
DDX55-208ENST00000541259 DNAJC9-AS1A6NH13 148 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 UPK2O00526 184 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 RRHO14718 337 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 OR2F2O95006 317 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 OR2A4O95047 310 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 NDUFA3O95167 84 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 AMY1AP04745 511 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 AKR1C2P52895 323 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 UBE2KP61086 200 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 SRPXP78539 464 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 SCGB2A2Q13296 93 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 FCN2Q15485 313 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 C5orf64Q2M2E5 130 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 NMSQ5H8A3 153 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 RBMS3Q6XE24 437 aaKnown RBP7.42□□□□□ -1.22
DDX55-208ENST00000541259 H2BFWTQ7Z2G1 175 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 REC114Q7Z4M0 266 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 FAM71E2Q8N5Q1 922 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 TEX45Q8NA69 505 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
DDX55-208ENST00000541259 OR10C1Q96KK4 312 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 OR2A7Q96R45 310 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 RANBP3Q9H6Z4 567 aaPredicted RBP7.42□□□□□ -1.22
DDX55-208ENST00000541259 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
DDX55-208ENST00000541259 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 MMP24Q9Y5R2 645 aa7.42□□□□□ -1.22
DDX55-208ENST00000541259 C13orf42A0A1B0GVH6 325 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 DUXBA0A1W2PPF3 345 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 BTBD17A6NE02 478 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 LINC01548A6NM66 108 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 FAM25EA8MYX2 175 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 GOSR2O14653 212 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 GPR137BO60478 399 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 KBTBD11O94819 623 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 SPDEFO95238 335 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 CXCL3P19876 107 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 VDAC1P21796 283 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 OR2B8PP59922 312 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 ERVK-16P61578 105 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 BLCAPP62952 87 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
DDX55-208ENST00000541259 SRSF2Q01130 221 aaKnown RBP7.41□□□□□ -1.22
DDX55-208ENST00000541259 PLGLAQ15195 96 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 PRSS8Q16651 343 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 CDPF1Q6NVV7 123 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 FAM219AQ8IW50 185 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 CADM3Q8N126 398 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 TMEM86BQ8N661 226 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 C5orf56Q8N8D9 126 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 RNASE11Q8TAA1 199 aaKnown RBP7.41□□□□□ -1.22
DDX55-208ENST00000541259 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
DDX55-208ENST00000541259 ZNF418Q8TF45 676 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms