RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
RNF4-222ENST00000541204 KITLGP21583 273 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 ATP5G3P48201 142 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 FAM201AQ5SY85 155 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 IGFL3Q6UXB1 125 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 CD177Q8N6Q3 437 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 Q8N7P7 452 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 ACY3Q96HD9 319 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 DERL1Q9BUN8 251 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
RNF4-222ENST00000541204 PSG11Q9UQ72 335 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 PAX1P15863 534 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 FAM78BQ5VT40 261 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 CST9LP1Q5W188 147 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 OR6C3Q9NZP0 311 aa10.38□□□□□ -0.75
RNF4-222ENST00000541204 PGPEP1LA6NFU8 196 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 C15orf62A8K5M9 175 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 VENTXO95231 258 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 SRP14P37108 136 aaKnown RBP10.37□□□□□ -0.75
RNF4-222ENST00000541204 PDLIM4P50479 330 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 EDDM3BP56851 147 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 GNB1P62873 340 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 SMIM21Q3B7S5 101 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 ACOT6Q3I5F7 207 aaPredicted RBP10.37□□□□□ -0.75
RNF4-222ENST00000541204 C1orf185Q5T7R7 199 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 WFIKKN1Q96NZ8 548 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 A8MWP6 167 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
RNF4-222ENST00000541204 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 MOGAT3Q86VF5 341 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 OR2V2Q96R30 315 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 WASF3Q9UPY6 502 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 MKRN2OSH3BPM6 223 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 NDUFB4O95168 129 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 NDUFB7P17568 137 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 CD1BP29016 333 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 PRDX2P32119 198 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 FOXC1Q12948 553 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 CISD2Q8N5K1 135 aaKnown RBP10.37□□□□□ -0.75
RNF4-222ENST00000541204 ZNRF1Q8ND25 227 aa10.37□□□□□ -0.75
RNF4-222ENST00000541204 PATZ1Q9HBE1 687 aaKnown RBP10.37□□□□□ -0.75
RNF4-222ENST00000541204 IFNL4K9M1U5 179 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
RNF4-222ENST00000541204 IL3RAP26951 378 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 ASCL5Q7RTU5 278 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 DMRTC2Q8IXT2 367 aaPredicted RBP10.36□□□□□ -0.75
RNF4-222ENST00000541204 R3HDM4Q96D70 268 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 RELNP78509 3460 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 GCGP01275 180 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 TYMSP04818 313 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 C1QTNF9P0C862 333 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 ZNF114Q8NC26 417 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 TMEM204Q9BSN7 226 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 FAM234AQ9H0X4 552 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 WDR83OSQ9Y284 106 aa10.36□□□□□ -0.75
RNF4-222ENST00000541204 A0A0U1RQK1 487 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 A0A1W2PPV4 95 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 ZNF320A2RRD8 509 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 SLC31A2O15432 143 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 PDE6DO43924 150 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 SELLP14151 372 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 NBL1P41271 181 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
RNF4-222ENST00000541204 TIMM23BQ5SRD1 257 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 MRPL41Q8IXM3 137 aaKnown RBP10.35□□□□□ -0.75
RNF4-222ENST00000541204 TMEM18Q96B42 140 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 SDSLQ96GA7 329 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 DIRC2Q96SL1 478 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 HSD17B10Q99714 261 aaKnown RBP10.35□□□□□ -0.75
RNF4-222ENST00000541204 TP53TG5Q9Y2B4 290 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 IGKV1D-17A0A075B6S4 117 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 FCGR3BO75015 233 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 CRYABP02511 175 aaKnown RBP10.35□□□□□ -0.75
RNF4-222ENST00000541204 KLF3P57682 345 aaPredicted RBP10.35□□□□□ -0.75
RNF4-222ENST00000541204 VKORC1L1Q8N0U8 176 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 LRFN3Q9BTN0 628 aa10.35□□□□□ -0.75
RNF4-222ENST00000541204 A0A1B0GUS0 222 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 PROP1O75360 226 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 OR4A8P0C604 315 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 TAS2R60P59551 318 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 SSTP61278 116 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 SSX2Q16385 188 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 GCSAMQ8N6F7 178 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 ITLN1Q8WWA0 313 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
RNF4-222ENST00000541204 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 RPL15P61313 204 aaKnown RBP10.34□□□□□ -0.75
RNF4-222ENST00000541204 LCN2P80188 198 aa10.34□□□□□ -0.75
RNF4-222ENST00000541204 USF2Q15853 346 aaPredicted RBP10.34□□□□□ -0.75
RNF4-222ENST00000541204 LURAP1Q96LR2 239 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms