RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TBPP20226 339 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 S100GP29377 79 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 MYCNOSP40205 109 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 TPPP2P59282 170 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 TAS2R19P59542 299 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 KIAA0141Q14154 515 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-215ENST00000540904 C10orf55Q5SWW7 151 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 STEAP1BQ6NZ63 245 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 LPCAT3Q6P1A2 487 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 MMD2Q8IY49 270 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 LINC00482Q8N8I6 264 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF491Q8N8L2 437 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 TMEM229BQ8NBD8 167 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 WFDC9Q8NEX5 89 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 OR4D10Q8NGI6 311 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 SMIM4Q8WVI0 70 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 SRSF12Q8WXF0 261 aaKnown RBP7.18□□□□□ -1.26
SNHG1-215ENST00000540904 DGCR14Q96DF8 476 aaKnown RBP7.18□□□□□ -1.26
SNHG1-215ENST00000540904 P2RX4Q99571 388 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 AIFM2Q9BRQ8 373 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 RSRP1Q9BUV0 290 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 NXF2Q9GZY0 626 aaKnown RBP7.18□□□□□ -1.26
SNHG1-215ENST00000540904 GNB4Q9HAV0 340 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 HRASLSQ9HDD0 168 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF701M0R085 212 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-215ENST00000540904 CTDSPLO15194 276 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 TRGV3P03979 118 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 CD74P04233 296 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 RPA2P15927 270 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 NQO2P16083 231 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 F2RP25116 425 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 S100A5P33763 92 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 PPP5CP53041 499 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 UCP3P55916 312 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 TAS2R31P59538 309 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SSBP1Q04837 148 aaKnown RBP7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SCGB2B2Q4G0G5 96 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SAMD5Q5TGI4 173 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 ASPHD1Q5U4P2 390 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 OR4A47Q6IF82 309 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 FAAP20Q6NZ36 180 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 TBC1D26Q86UD7 250 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SLC38A6Q8IZM9 456 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 PUSL1Q8N0Z8 303 aaKnown RBP7.17□□□□□ -1.26
SNHG1-215ENST00000540904 ARRDC1Q8N5I2 433 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 DMBX1Q8NFW5 382 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 TMEM167AQ8TBQ9 72 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 TMEM68Q96MH6 324 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SPIN2AQ99865 258 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SPIN2BQ9BPZ2 258 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-215ENST00000540904 SLA2Q9H6Q3 261 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 PLEKHA2Q9HB19 425 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 COA4Q9NYJ1 87 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 RABL2AQ9UBK7 228 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-215ENST00000540904 RABL2BQ9UNT1 228 aa7.17□□□□□ -1.26
SNHG1-215ENST00000540904 HMX3A6NHT5 357 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 I3L521 148 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 GSTZ1O43708 216 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-215ENST00000540904 KRASP01116 189 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 IGHV3-11P01762 117 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 PI3P19957 117 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 MAS1LP35410 378 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 LPAR6P43657 344 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 RPL27AP46776 148 aaKnown RBP7.16□□□□□ -1.26
SNHG1-215ENST00000540904 ERVK-16P61578 105 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 RPL8P62917 257 aaKnown RBP7.16□□□□□ -1.26
SNHG1-215ENST00000540904 MEF2DQ14814 521 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 BEAN1Q3B7T3 259 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF585BQ52M93 769 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 LHFPL1Q86WI0 220 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 OR4A5Q8NH83 315 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 TERB2Q8NHR7 220 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 RCC1LQ96I51 464 aaKnown RBP7.16□□□□□ -1.26
SNHG1-215ENST00000540904 FYTTD1Q96QD9 318 aaKnown RBP7.16□□□□□ -1.26
SNHG1-215ENST00000540904 SOSTQ9BQB4 213 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 SLC2A9Q9NRM0 540 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 TMEM140Q9NV12 185 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 BET1LQ9NYM9 111 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 COMMD9Q9P000 198 aa7.16□□□□□ -1.26
SNHG1-215ENST00000540904 PLXNB1O43157 2135 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 C13orf42A0A1B0GVH6 325 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 MARCH11A6NNE9 402 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 TEX22C9J3V5 150 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 E7EUB6 86 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 H3BUA1 57 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 J3QL48 77 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 UPK2O00526 184 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 DUS4LO95620 317 aaKnown RBP7.15□□□□□ -1.26
SNHG1-215ENST00000540904 PRH1P02810 166 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-215ENST00000540904 LGALS1P09382 135 aaKnown RBP7.15□□□□□ -1.26
SNHG1-215ENST00000540904 OR9G9P0C7N8 305 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF735P0CB33 412 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 AKAIN1P0CW23 69 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 MYOD1P15172 320 aa7.15□□□□□ -1.26
SNHG1-215ENST00000540904 HLA-GP17693 338 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms