RNA–Protein interactions for RNA: ENST00000540665.5

TTC28-AS1-221, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-221ENST00000540665 CTDSP2O14595 271 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 TRGV3P03979 118 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 FGF2P09038 288 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 UCP3P55916 312 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 SSBP1Q04837 148 aaKnown RBP12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 OR52I2Q8NH67 350 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
TTC28-AS1-221ENST00000540665 MSGN1A6NI15 193 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RLN1P04808 185 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 OR9G9P0C7N8 305 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 NQO2P16083 231 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RAB25P57735 213 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 OR4A47Q6IF82 309 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 FCAMRQ8WWV6 532 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TINAGL1Q9GZM7 467 aaPredicted RBP12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 CEPT1Q9Y6K0 416 aa12.52□□□□□ -0.41
TTC28-AS1-221ENST00000540665 NOTCH3Q9UM47 2321 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 CTDSPLO15194 276 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 F2RP25116 425 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 S100GP29377 79 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SLC38A6Q8IZM9 456 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 OR5B12Q96R08 314 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RSRP1Q9BUV0 290 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZNF355PQ9NSJ1 428 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 AURKAIP1Q9NWT8 199 aaPredicted RBP12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZMAT5Q9UDW3 170 aaKnown RBP12.51□□□□□ -0.41
TTC28-AS1-221ENST00000540665 LINC01619G3V211 115 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 MPPED1O15442 326 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 S1PR2O95136 353 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 CD74P04233 296 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 IL6RP08887 468 aaPredicted RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZNF735P0CB33 412 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RPL27AP46776 148 aaKnown RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TAS2R19P59542 299 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RPL8P62917 257 aaKnown RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 C10orf55Q5SWW7 151 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SSX9Q7RTT3 188 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SLC25A42Q86VD7 318 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 LHFPL1Q86WI0 220 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 CADM3Q8N126 398 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 DGCR14Q96DF8 476 aaKnown RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 USMG5Q96IX5 58 aa12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 C6orf62Q9GZU0 229 aaPredicted RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 NXF2Q9GZY0 626 aaKnown RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ALX4Q9H161 411 aaPredicted RBP12.5□□□□□ -0.41
TTC28-AS1-221ENST00000540665 IGHV4OR15-8A0A075B7B6 117 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 A0A087WW49 117 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 C13orf42A0A1B0GVH6 325 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TEX22C9J3V5 150 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 M0QYG6 137 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 CD3DP04234 171 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 HSPB1P04792 205 aaKnown RBP12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 IFNA6P05013 189 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 HLA-GP17693 338 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZNF486Q96H40 463 aaPredicted RBP12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 DIRAS2Q96HU8 199 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RBM38Q9H0Z9 239 aaKnown RBP12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TMEM140Q9NV12 185 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZNF257Q9Y2Q1 563 aa12.49□□□□□ -0.41
TTC28-AS1-221ENST00000540665 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 FAM223BA6NKX1 122 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ZNF701M0R085 212 aaPredicted RBP12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 IGHV3-11P01762 117 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 APELAP0DMC3 54 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 INSL3P51460 131 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 ERVK-16P61578 105 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 RND3P61587 244 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 DGCR2P98153 550 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 IL18Q14116 193 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 FAM223AQ8IWN6 122 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
TTC28-AS1-221ENST00000540665 SEC14L6B5MCN3 397 aa12.47□□□□□ -0.41
TTC28-AS1-221ENST00000540665 UPK2O00526 184 aa12.47□□□□□ -0.41
TTC28-AS1-221ENST00000540665 OVOL1O14753 267 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms