RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RAB3BP20337 219 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 GALP22466 123 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 ARL3P36405 182 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 AQP4P55087 323 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 RPL30P62888 115 aaKnown RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 TBCEQ15813 527 aaPredicted RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 ANKRD55Q3KP44 614 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 FAM106AQ4KMX7 169 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 ZNF57Q68EA5 555 aaPredicted RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 OR4A47Q6IF82 309 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 CNIH2Q6PI25 160 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 ZNF367Q7RTV3 350 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 PUSL1Q8N0Z8 303 aaKnown RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 CCDC140Q96MF4 163 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 FANCD2OSQ96PS1 177 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 FYTTD1Q96QD9 318 aaKnown RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 TRDV1A0A1B0GX56 115 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 TMEM213A2RRL7 107 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 J3QRK9 145 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 SCGNO76038 276 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 NDUFB8O95169 186 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 HIST1H1BP16401 226 aaKnown RBP9□□□□□ -0.97
CBX3P4-202ENST00000540428 EDN2P20800 178 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 NFYAP23511 347 aaPredicted RBP9□□□□□ -0.97
CBX3P4-202ENST00000540428 PSMB6P28072 239 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 EIF4EBP1Q13541 118 aaPredicted RBP9□□□□□ -0.97
CBX3P4-202ENST00000540428 CDNFQ49AH0 187 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 HACD4Q5VWC8 232 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 CLEC19AQ6UXS0 136 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 ZNF66Q6ZN08 573 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 TMEM61Q8N0U2 210 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 EEF1AKMT3Q96AZ1 226 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 ST6GALNAC5Q9BVH7 336 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 GGTLC1Q9BX51 225 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 ATG5Q9H1Y0 275 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 NDUFB11Q9NX14 153 aa9□□□□□ -0.97
CBX3P4-202ENST00000540428 LOC102724200A0A096LPH7 203 aaPredicted RBP8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 TRBV7-1A0A0A6YYK4 115 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 TRAV25A0A0B4J276 109 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 E7EUB6 86 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 HRASP01112 189 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 CTRB1P17538 263 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 MSMO1Q15800 293 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 OR2B11Q5JQS5 317 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 CTRB2Q6GPI1 263 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 VKORC1L1Q8N0U8 176 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 MFSD4AQ8N468 514 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 OR52B4Q8NGK2 314 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 OR4A5Q8NH83 315 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 CXorf58Q96LI9 332 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 AIFM2Q9BRQ8 373 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 MLXQ9UH92 298 aa8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 ELF5Q9UKW6 265 aaPredicted RBP8.99□□□□□ -0.97
CBX3P4-202ENST00000540428 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 IGLV11-55A0A075B6I3 123 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 IGKV1D-13A0A0B4J2D9 117 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 A0A1B0GW64 132 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 ZNF320A2RRD8 509 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 C8orf88P0DMB2 117 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 IGKV1-13P0DP09 117 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 AREGP15514 252 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 ELLP55199 621 aaPredicted RBP8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 BRWD1-AS2P59051 145 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 RPL8P62917 257 aaKnown RBP8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 C19orf35Q6ZS72 473 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 NR2C2APQ86WQ0 139 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 OVOL2Q9BRP0 275 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 BET1LQ9NYM9 111 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 ANXA10Q9UJ72 324 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 BLOC1S6Q9UL45 172 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 SPATA2Q9UM82 520 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 TP53TG1Q9Y2A0 90 aa8.98□□□□□ -0.97
CBX3P4-202ENST00000540428 TMEM235A6NFC5 223 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 NOTOA8MTQ0 251 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 IGHV3-23P01764 117 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 CLEC3BP05452 202 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 DEFA4P12838 97 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 HLA-GP17693 338 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 GNG2P59768 71 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 NUDCD2Q8WVJ2 157 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 SRSF8Q9BRL6 282 aaKnown RBP8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 TAS2R8Q9NYW2 309 aa8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 MRPL27Q9P0M9 148 aaKnown RBP8.97□□□□□ -0.97
CBX3P4-202ENST00000540428 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.97
CBX3P4-202ENST00000540428 NUPR2A6NF83 97 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 RBFOX2O43251 390 aaKnown RBP eCLIP8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 SCAF4O95104 1147 aaKnown RBP8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 FGF2P09038 288 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 TM4SF20Q53R12 229 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 C22orf42Q6IC83 251 aa8.96□□□□□ -0.98
CBX3P4-202ENST00000540428 BTNL8Q6UX41 500 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms