RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 A0A1B0GU03 582 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 DLL1O00548 723 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 JTBO76095 146 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 FBXL19-AS1Q494R0 122 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 CXorf66Q5JRM2 361 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-212ENST00000540304 EIF5AL1Q6IS14 154 aaKnown RBP8.01□□□□□ -1.13
CLIP1-212ENST00000540304 RFESDQ8TAC1 157 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 SMIM12Q96EX1 92 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 TUBA4BQ9H853 241 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 DYSFO75923 2080 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 A0A0G2JRQ6 117 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 A0A1W2PPE2 198 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 C7orf77A4D0Y5 90 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 CCL21O00585 134 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 FGF16O43320 207 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 IGKV1-39P01597 117 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 IGKV1D-39P04432 117 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 MMP9P14780 707 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 EDDM3BP56851 147 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 CCL8P80075 99 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 ID3Q02535 119 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 TLE1Q04724 770 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 CATR1Q13166 79 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 EIF4EBP1Q13541 118 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF585BQ52M93 769 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 OCIAD2Q56VL3 154 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 AWAT1Q58HT5 328 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 OR6C3Q9NZP0 311 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 JPT1Q9UK76 154 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 DSCAMO60469 2012 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
CLIP1-212ENST00000540304 TRAV26-1A0A087WT03 109 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 IGHV3-43A0A0B4J1X8 118 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 LRRC30A6NM36 301 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 SHISA9B4DS77 424 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 F6UZH7 168 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 SSSCA1O60232 199 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 PITX3O75364 302 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 CLEC3BP05452 202 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 IGHV3-43DP0DP04 118 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 IZUMO4Q1ZYL8 232 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 TEX36Q5VZQ5 186 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF808Q8N4W9 903 aaPredicted RBP8□□□□□ -1.13
CLIP1-212ENST00000540304 PLPPR2Q96GM1 343 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 C5orf30Q96GV9 206 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 FAM234AQ9H0X4 552 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF665Q9H7R5 613 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 FAM90A27PA6NNH2 459 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 DVL1O14640 695 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 CEACAM3P40198 252 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
CLIP1-212ENST00000540304 UBE2V1Q13404 147 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 DEFB108BQ8NET1 73 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 RNASE6Q93091 150 aaKnown RBP8□□□□□ -1.13
CLIP1-212ENST00000540304 PINX1Q96BK5 328 aaKnown RBP8□□□□□ -1.13
CLIP1-212ENST00000540304 GAFA1Q96PS6 74 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 C20orf24Q9BUV8 137 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
CLIP1-212ENST00000540304 MAGT1Q9H0U3 335 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 RAB9BQ9NP90 201 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 LYRM2Q9NU23 88 aaPredicted RBP8□□□□□ -1.13
CLIP1-212ENST00000540304 GNG12Q9UBI6 72 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 SMPXQ9UHP9 88 aa8□□□□□ -1.13
CLIP1-212ENST00000540304 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 F2RL2O00254 374 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 IGKV1-5P01602 117 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 FHITP49789 147 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 CAV2P51636 162 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 LTC4SQ16873 150 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF788Q6ZQV5 615 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 TGIF2LYQ8IUE0 185 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 SAT2Q96F10 170 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-212ENST00000540304 SLC25A31Q9H0C2 315 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 SAP30LQ9HAJ7 183 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 CACFD1Q9UGQ2 172 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 PSG11Q9UQ72 335 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 TBL2Q9Y4P3 447 aaKnown RBP7.99□□□□□ -1.13
CLIP1-212ENST00000540304 TANC2Q9HCD6 1990 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 TACC2O95359 2948 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 DEFB108AA8MXU0 73 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 E7EQL1 145 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 YPEL1O60688 119 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 NDUFB8O95169 186 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 GYPAP02724 150 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 CD3EP07766 207 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 FAM157CP0CG43 387 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 LPAR6P43657 344 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 RPL30P62888 115 aaKnown RBP7.99□□□□□ -1.13
CLIP1-212ENST00000540304 MORN2Q502X0 79 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 HEPN1Q6WQI6 88 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 ZNF66Q6ZN08 573 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 ZCCHC24Q8N2G6 241 aaKnown RBP7.99□□□□□ -1.13
CLIP1-212ENST00000540304 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 YPEL2Q96QA6 119 aa7.99□□□□□ -1.13
CLIP1-212ENST00000540304 HSD17B10Q99714 261 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms