RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 DCSTAMPQ9H295 470 aa8.63□□□□□ -1.03
CLSTN3-209ENST00000539982 RNF167Q9H6Y7 350 aa8.63□□□□□ -1.03
CLSTN3-209ENST00000539982 SDHAF2Q9NX18 166 aa8.63□□□□□ -1.03
CLSTN3-209ENST00000539982 KIR2DL5BA0A0G2JN68 375 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 KIR2DL5BA0A0G2JPC4 375 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 A8MWP6 167 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 ZNF182P17025 639 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 ARL3P36405 182 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 UNC119Q13432 240 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 INSL4Q14641 139 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 C1orf100Q5SVJ3 147 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 IDO2Q6ZQW0 420 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 RBPMS2Q6ZRY4 209 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 SLC25A42Q86VD7 318 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 KIR2DL5AQ8N109 375 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 OR2C3Q8N628 320 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 STPG3Q8N7X2 389 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 OR1L6Q8NGR2 347 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 DYNC2LI1Q8TCX1 351 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 PHYHIPQ92561 330 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 FBXL7Q9UJT9 491 aa8.62□□□□□ -1.03
CLSTN3-209ENST00000539982 A0A0A6YYD4 124 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 TMEM14DPA8MWL7 114 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 TRDCB7Z8K6 153 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 SOCS1O15524 211 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 ARL6IP5O75915 188 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 ACTL6BO94805 426 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 SRMP19623 302 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 MYL9P24844 172 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 MAPK3P27361 379 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 QRFPP83859 136 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 OR4A47Q6IF82 309 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 BTNL8Q6UX41 500 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 CLEC19AQ6UXS0 136 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 OR2D2Q9H210 308 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 ZNF430Q9H8G1 570 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 C12orf4Q9NQ89 552 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 CCDC59Q9P031 241 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 HSF4Q9ULV5 492 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 ZNF257Q9Y2Q1 563 aa8.61□□□□□ -1.03
CLSTN3-209ENST00000539982 VPS13DQ5THJ4 4388 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 CREBL2O60519 120 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 CRYZL1O95825 349 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 BPNT1O95861 308 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 IFNA4P05014 189 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 UCHL1P09936 223 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 C8orf88P0DMB2 117 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 SDC2P34741 201 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 TCTAP57738 103 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 HSD17B12Q53GQ0 312 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 MMD2Q8IY49 270 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 FAM89BQ8N5H3 189 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 OR4A4PQ8NGN8 299 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 OSR1Q8TAX0 266 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 C5orf30Q96GV9 206 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 LPAR5Q9H1C0 372 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 KCNK15Q9H427 330 aa8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-209ENST00000539982 TRAV1-2A0A0B4J238 106 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 CD37P11049 281 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 RPS19P39019 145 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 RORCP51449 518 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 TMEM50BP56557 158 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 MXD1Q05195 221 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 CDK10Q15131 360 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 ZNF585BQ52M93 769 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 LRRTM1Q86UE6 522 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 TPRA1Q86W33 373 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 ADTRPQ96IZ2 230 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 CMSS1Q9BQ75 279 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 URM1Q9BTM9 101 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 UBQLN2Q9UHD9 624 aa8.59□□□□□ -1.03
CLSTN3-209ENST00000539982 HMX3A6NHT5 357 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 NPIPB5A8MRT5 1133 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 FOXI3A8MTJ6 420 aaPredicted RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 BET1O15155 118 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 FABP7O15540 132 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 CD3GP09693 182 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 SAA1P0DJI8 122 aaPredicted RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 CTRB1P17538 263 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 NANOS2P60321 138 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 RBMS2Q15434 407 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 KLK9Q2XQG4 91 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 C10orf55Q5SWW7 151 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 CTRB2Q6GPI1 263 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 UNQ9165/PRO28630Q6UXU0 137 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms