RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 LYL1P12980 280 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 CTLA4P16410 223 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 USF1P22415 310 aaPredicted RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 CCL11P51671 97 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 GAGE4Q13068 117 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 GLIPR1L1Q6UWM5 242 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 SLC25A38Q96DW6 304 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 SERTAD4Q9NUC0 356 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 B4GALT7Q9UBV7 327 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 CYSLTR1Q9Y271 337 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 OR4C45A6NMZ5 311 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 PRR32B1ATL7 298 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 ORM1P02763 201 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 DSCR4P56555 118 aaPredicted RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 UBE2NLQ5JXB2 153 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 FAM27D1Q5T7N8 215 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 MDGA2Q7Z553 956 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 CNTRLQ7Z7A1 2325 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 ZNF611Q8N823 705 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 TMEM116Q8NCL8 245 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 LHX4Q969G2 390 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 PDCD1LG2Q9BQ51 273 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 RTBDNQ9BSG5 229 aaPredicted RBP10.62□□□□□ -0.71
DDX55-206ENST00000539934 PROK2Q9HC23 129 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 MED12Q93074 2177 aa10.62□□□□□ -0.71
DDX55-206ENST00000539934 CACNA1CQ13936 2221 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 M0R1X1 148 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 GAPDHP04406 335 aaKnown RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 P04436 131 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 ALOX5APP20292 161 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 FKBP2P26885 142 aaKnown RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 TAS2R20P59543 309 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 GNB2P62879 340 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 ZNF92Q03936 586 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 OTPQ5XKR4 325 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 PRSS45Q7RTY3 260 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 ZIC4Q8N9L1 334 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 WDR61Q9GZS3 305 aaKnown RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 MS4A5Q9H3V2 200 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 PCSK5Q92824 1860 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 MAP1AP78559 2803 aaPredicted RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 IGLV1-36A0A0B4J1U3 117 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 NPIPB13A6NJU9 1138 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 NPIPB4C9JG80 1138 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 CD1AP06126 327 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 PRTN3P24158 256 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 FOXL1Q12952 345 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 MPV17LQ2QL34 196 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 SLC25A35Q3KQZ1 300 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 SLC18B1Q6NT16 456 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 DNM1P46Q6ZS02 220 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 OTOSQ8NHW6 89 aa10.61□□□□□ -0.71
DDX55-206ENST00000539934 FNDC4Q9H6D8 234 aaPredicted RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 COA3Q9Y2R0 106 aaPredicted RBP10.61□□□□□ -0.71
DDX55-206ENST00000539934 A0A1W2PPK0 400 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 ARL6IP5O75915 188 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 NUDT3O95989 172 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 PMCHP20382 165 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 NANOS3P60323 173 aaKnown RBP10.6□□□□□ -0.71
DDX55-206ENST00000539934 HLA-DRB3P79483 266 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 FMODQ06828 376 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 C8orf86Q6ZUL3 223 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 CMTM2Q8TAZ6 248 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 EMC6Q9BV81 110 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 PECRQ9BY49 303 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 KCNIP1Q9NZI2 227 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 IFNL4K9M1U5 179 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 HSPB1P04792 205 aaKnown RBP10.6□□□□□ -0.71
DDX55-206ENST00000539934 B4GALT1P15291 398 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 KIR2DL2P43627 348 aaPredicted RBP10.6□□□□□ -0.71
DDX55-206ENST00000539934 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.6□□□□□ -0.71
DDX55-206ENST00000539934 ZADH2Q8N4Q0 377 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 TTC9CQ8N5M4 171 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 Q8N976 141 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 OR8G5Q8NG78 346 aa10.6□□□□□ -0.71
DDX55-206ENST00000539934 POLEQ07864 2286 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 SFT2D2O95562 160 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 ZNF823P16415 610 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 CD34P28906 385 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 ZNF133P52736 654 aaPredicted RBP10.59□□□□□ -0.71
DDX55-206ENST00000539934 BVES-AS1Q5T3Y7 98 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 ZNF474Q6S9Z5 364 aaPredicted RBP10.59□□□□□ -0.71
DDX55-206ENST00000539934 OR5AN1Q8NGI8 311 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 PARLQ9H300 379 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 OR1A1Q9P1Q5 309 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
DDX55-206ENST00000539934 KIR2DS1A0A191URI9 304 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms