RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RBMS2Q15434 407 aaKnown RBP12.42□□□□□ -0.42
DDB1-216ENST00000539739 C21orf62-AS1Q17RA5 79 aa12.42□□□□□ -0.42
DDB1-216ENST00000539739 SSMEM1Q8WWF3 244 aa12.42□□□□□ -0.42
DDB1-216ENST00000539739 C5orf30Q96GV9 206 aa12.42□□□□□ -0.42
DDB1-216ENST00000539739 CARHSP1Q9Y2V2 147 aaKnown RBP12.42□□□□□ -0.42
DDB1-216ENST00000539739 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 TNFSF12O43508 249 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 APOA2P02652 100 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 CTSDP07339 412 aaPredicted RBP12.41□□□□□ -0.42
DDB1-216ENST00000539739 MC5RP33032 325 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 DUTP33316 252 aaKnown RBP12.41□□□□□ -0.42
DDB1-216ENST00000539739 CCR6P51684 374 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 CATR1Q13166 79 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 C10orf91Q5T1B1 145 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 OR5R1Q8NH85 324 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 GPR132Q9UNW8 380 aa12.41□□□□□ -0.42
DDB1-216ENST00000539739 IGHV3-72A0A0B4J1Y9 119 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 RNF212BA8MTL3 300 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 H3BUX3 64 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 CRYBA1P05813 215 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 FAM106CPP0CH98 169 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 IER3P46695 156 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 RAB5CP51148 216 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 RAP2BP61225 183 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 KCTD9Q7L273 389 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 ZNF383Q8NA42 475 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 OR5AN1Q8NGI8 311 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 CFHR4Q92496 578 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 MRGPRFQ96AM1 343 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 PGLYRP1O75594 196 aaPredicted RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 ANXA7P20073 488 aaKnown RBP12.4□□□□□ -0.42
DDB1-216ENST00000539739 S100A11P31949 105 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 BTCP35070 178 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 PIGPP57054 158 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 HES1Q14469 280 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 TMEM86BQ8N661 226 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 RAB24Q969Q5 203 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 PITPNC1Q9UKF7 332 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 WASHC3Q9Y3C0 194 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
DDB1-216ENST00000539739 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 LINC00473A8K010 186 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 H0YJW9 148 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
DDB1-216ENST00000539739 NDUFB6O95139 128 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
DDB1-216ENST00000539739 LINC00614P0C842 121 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 PI3P19957 117 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 LINC00205P59089 165 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 RND3P61587 244 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
DDB1-216ENST00000539739 EIF4EBP1Q13541 118 aaPredicted RBP12.39□□□□□ -0.43
DDB1-216ENST00000539739 RTL8BQ17RB0 113 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 KCNIP3Q9Y2W7 256 aa12.39□□□□□ -0.43
DDB1-216ENST00000539739 VENTXO95231 258 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 RLN1P04808 185 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 CD24P25063 80 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 KIR2DS2P43631 304 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 RPL30P62888 115 aaKnown RBP12.38□□□□□ -0.43
DDB1-216ENST00000539739 TBC1D26Q86UD7 250 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 PDPNQ86YL7 162 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 OR2T35Q8NGX2 323 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 OR2T10Q8NGZ9 312 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 GPHA2Q96T91 129 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 RTBDNQ9BSG5 229 aaPredicted RBP12.38□□□□□ -0.43
DDB1-216ENST00000539739 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
DDB1-216ENST00000539739 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
DDB1-216ENST00000539739 MPPED1O15442 326 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 FCGR3BO75015 233 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 MOSP00540 346 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TMEM11P17152 192 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 HILS1P60008 231 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 PKIAP61925 76 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
DDB1-216ENST00000539739 EBI3Q14213 229 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 COQ8AQ8NI60 647 aa12.37□□□□□ -0.43
DDB1-216ENST00000539739 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms