RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 TMEM229BQ8NBD8 167 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 VSIG4Q9Y279 399 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 M0QYG6 137 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 ATP6V0E1O15342 81 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
USB1-203ENST00000539737 TNFSF12O43508 249 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 GSTZ1O43708 216 aaPredicted RBP11.54□□□□□ -0.56
USB1-203ENST00000539737 CREBL2O60519 120 aaPredicted RBP11.54□□□□□ -0.56
USB1-203ENST00000539737 IGLV2-23P01705 113 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 CD74P04233 296 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 CD3DP04234 171 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 OR8U8P0C7N1 319 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 PSMB8P28062 276 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 S100GP29377 79 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 SLURP1P55000 103 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 UBE2KP61086 200 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 KIAA0141Q14154 515 aaPredicted RBP11.54□□□□□ -0.56
USB1-203ENST00000539737 MEF2DQ14814 521 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 AADACL3Q5VUY0 350 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 PPP1R27Q86WC6 154 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 TCTEX1D1Q8N7M0 179 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 DCUN1D4Q92564 292 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
USB1-203ENST00000539737 GPR31O00270 319 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 CA2P00918 260 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 GNRHRP30968 328 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 CRIP2P52943 208 aaPredicted RBP11.53□□□□□ -0.56
USB1-203ENST00000539737 CX3CL1P78423 397 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 NDPQ00604 133 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 ECSCRQ19T08 205 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 STEAP1BQ6NZ63 245 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 TEX45Q8NA69 505 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 POC5Q8NA72 575 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 TINAGL1Q9GZM7 467 aaPredicted RBP11.53□□□□□ -0.56
USB1-203ENST00000539737 TPSG1Q9NRR2 321 aa11.53□□□□□ -0.56
USB1-203ENST00000539737 DPPA5A6NC42 116 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 RAB3DO95716 219 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 HRASP01112 189 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 CRYGBP07316 175 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 SAA1P0DJI8 122 aaPredicted RBP11.52□□□□□ -0.57
USB1-203ENST00000539737 PTBP1P26599 531 aaKnown RBP eCLIP11.52□□□□□ -0.573e-43■■■■■ 106.8
USB1-203ENST00000539737 UCP3P55916 312 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 ZNF616Q08AN1 781 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 ARPC1AQ92747 370 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 SOSTQ9BQB4 213 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 AIFM2Q9BRQ8 373 aa11.52□□□□□ -0.57
USB1-203ENST00000539737 A0A1W2PN81 502 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
USB1-203ENST00000539737 FCN1O00602 326 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 SAP30O75446 220 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 RLN1P04808 185 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 AKAIN1P0CW23 69 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 PPIFP30405 207 aaKnown RBP11.51□□□□□ -0.57
USB1-203ENST00000539737 CHRNA7P36544 502 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 RAB9AP51151 201 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 INSL3P51460 131 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
USB1-203ENST00000539737 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
USB1-203ENST00000539737 GPHA2Q96T91 129 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 RSRP1Q9BUV0 290 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 FOXA2Q9Y261 457 aaPredicted RBP11.51□□□□□ -0.57
USB1-203ENST00000539737 V9GYH0 126 aa11.51□□□□□ -0.57
USB1-203ENST00000539737 DISC1C4P0D8 188 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 I3L521 148 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
USB1-203ENST00000539737 CNIH1O95406 144 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 HPRT1P00492 218 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 GP9P14770 177 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 PGAM2P15259 253 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 TAS2R31P59538 309 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 RUNX1Q01196 453 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 FXYD3Q14802 87 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 PRSS8Q16651 343 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 PYDC2Q56P42 97 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 CCDC190Q86UF4 302 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 MYOZ3Q8TDC0 251 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 FBXO7Q9Y3I1 522 aa11.5□□□□□ -0.57
USB1-203ENST00000539737 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
USB1-203ENST00000539737 ACTL6BO94805 426 aa11.49□□□□□ -0.57
USB1-203ENST00000539737 KBTBD11O94819 623 aa11.49□□□□□ -0.57
USB1-203ENST00000539737 OR2A4O95047 310 aa11.49□□□□□ -0.57
USB1-203ENST00000539737 F2RP25116 425 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms