RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TNRC6BQ9UPQ9 1833 aaKnown RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 LOXHD1Q8IVV2 1947 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TRAV8-3A0A0A6YYJ7 113 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 A0A0G2JN53 185 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 A0A1B0GUV1 79 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 hADV38S2A0JD32 116 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PLAC8L1A1L4L8 177 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 GMNCA6NCL1 334 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 RPL37AP8A6NKH3 93 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 KLLNB2CW77 178 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 ATP6V1G2-DDX39BF2Z307 99 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 SAP18O00422 153 aaKnown RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 COPEO14579 308 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 OR2J2O76002 312 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 GADD45GO95257 159 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 CCNE2O96020 404 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 IGLV2-11P01706 119 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 CRYBA1P05813 215 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PHBP35232 272 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 APLNRP35414 380 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 MEOX2P50222 304 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 FABP5Q01469 135 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PAX8Q06710 450 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PNOCQ13519 176 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 JOSD1Q15040 202 aaPredicted RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF404Q494X3 552 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TCTEX1D4Q5JR98 221 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 ATAD3CQ5T2N8 411 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 FBXW12Q6X9E4 464 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF493Q6ZR52 646 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TMPPEQ6ZT21 453 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 RFLNAQ6ZTI6 216 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 GOLT1AQ6ZVE7 132 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 ZNF771Q7L3S4 317 aaPredicted RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TCF24Q7RTU0 167 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 VN1R4Q7Z5H5 301 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 LRRC28Q86X40 367 aaPredicted RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 OSR2Q8N2R0 312 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 DEFB125Q8N687 156 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 LINC00337Q8N6G1 96 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 GNPDA2Q8TDQ7 276 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 C1orf54Q8WWF1 131 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TMEM159Q96B96 161 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 L3HYPDHQ96EM0 354 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 OR7D2Q96RA2 312 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 KLF6Q99612 283 aaPredicted RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 EBF4Q9BQW3 602 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 RSPO3Q9BXY4 272 aaPredicted RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PARP12Q9H0J9 701 aaKnown RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 RNASE7Q9H1E1 156 aaKnown RBP2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 CCL28Q9NRJ3 127 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 C14orf105Q9NVL8 296 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 TMEM216Q9P0N5 145 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 NEU3Q9UQ49 428 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 PSG8Q9UQ74 426 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 HDGFL3Q9Y3E1 203 aa2.84□□□□□ -1.95
AC055720.1-201ENST00000539552 COL4A2P08572 1712 aa2.84□□□□□ -1.96
AC055720.1-201ENST00000539552 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 IGKV1-8A0A0C4DH67 115 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 FAM236DA0A1B0GTK5 79 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 ARL5CA6NH57 179 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 OR5H1A6NKK0 313 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 IFITM10A6NMD0 228 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 E7EQ34 232 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 HMGB3O15347 200 aaKnown RBP2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 IGHMP01871 453 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 FAM236CP0DP71 79 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 FGF6P10767 208 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 FOLR2P14207 255 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 SPI1P17947 270 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 CDK2P24941 298 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 TALDO1P37837 337 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 MAP2K4P45985 399 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 GFERP55789 205 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 CKS1BP61024 79 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 TBPL1P62380 186 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 HLA-DRB3P79483 266 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 CDK5Q00535 292 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 CD47Q08722 323 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 RNF212Q495C1 297 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 PRR30Q53SZ7 412 aaPredicted RBP2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 LRRC10Q5BKY1 277 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 MESTQ5EB52 335 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 C1orf194Q5T5A4 169 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 C9orf64Q5T6V5 341 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 HENMT1Q5T8I9 393 aaKnown RBP2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 LCN8Q6JVE9 175 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 ZNF343Q6P1L6 599 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 Q6ZRU5 148 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 C3orf62Q6ZUJ4 267 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 TMEM61Q8N0U2 210 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 FAM24BQ8N5W8 94 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 ZIC4Q8N9L1 334 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 NEURL3Q96EH8 262 aa2.83□□□□□ -1.96
AC055720.1-201ENST00000539552 ANKRD36BP1Q96IX9 119 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms