RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 OCMP0CE72 109 aaPredicted RBP2.61□□□□□ -1.99
TRAV11-201ENST00000539512 NPPCP23582 126 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 H2BFSP57053 126 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 SPATA31B1PQ5VZV4 182 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 OR52B2Q96RD2 323 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 C11orf1Q9H5F2 150 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 GMEB1Q9Y692 573 aa2.61□□□□□ -1.99
TRAV11-201ENST00000539512 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
TRAV11-201ENST00000539512 GCN1Q92616 2671 aaKnown RBP2.6□□□□□ -1.99
TRAV11-201ENST00000539512 MRC1P22897 1456 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 TRAV8-1A0A0A6YYK1 113 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 C19orf71A6NCJ1 209 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 TMEM235A6NFC5 223 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 NDUFS6O75380 124 aaKnown RBP2.6□□□□□ -1.99
TRAV11-201ENST00000539512 ALOX5APP20292 161 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 CRHBPP24387 322 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 CA7P43166 264 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 HLA-DRB5Q30154 266 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 SDHAF4Q5VUM1 108 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 AMTNQ6UX39 209 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 OR2D3Q8NGH3 330 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 TMBIM1Q969X1 311 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 MROQ9BYG7 248 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 NKX6-2Q9C056 277 aaPredicted RBP2.6□□□□□ -1.99
TRAV11-201ENST00000539512 CFAP45Q9UL16 551 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 BPTFQ12830 3046 aa2.6□□□□□ -1.99
TRAV11-201ENST00000539512 SMG6Q86US8 1419 aaKnown RBP2.59□□□□□ -1.99
TRAV11-201ENST00000539512 MUC21A0A0G2JKD1 596 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 MUC21A0A140T8X8 626 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 LINC00854A0A1B0GVQ3 168 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 GOLGA6L10A6NI86 522 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 MRASO14807 208 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 CALUO43852 315 aaPredicted RBP2.59□□□□□ -1.99
TRAV11-201ENST00000539512 HERVK_113P63121 156 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 BTN3A2P78410 334 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 PRDX4Q13162 271 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 MESTQ5EB52 335 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 GLT6D1Q7Z4J2 308 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 OR4X2Q8NGF9 303 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 PECRQ9BY49 303 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 CXCL16Q9H2A7 254 aa2.59□□□□□ -1.99
TRAV11-201ENST00000539512 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -1.99
TRAV11-201ENST00000539512 PUS1Q9Y606 427 aaKnown RBP eCLIP2.59□□□□□ -1.99
TRAV11-201ENST00000539512 ACACBO00763 2458 aa2.59□□□□□ -2
TRAV11-201ENST00000539512 CCDC88AQ3V6T2 1871 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 MYO16Q9Y6X6 1858 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 NFAT5O94916 1531 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 DNAH14Q0VDD8 3507 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 SLC17A3O00476 420 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 LINC00313P59037 77 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 DMTNQ08495 405 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 SS18Q15532 418 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 PPCDCQ96CD2 204 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 C7orf50Q9BRJ6 194 aaKnown RBP2.58□□□□□ -2
TRAV11-201ENST00000539512 OR51B6Q9H340 312 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 HDGFL3Q9Y3E1 203 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 USP9XQ93008 2570 aaPredicted RBP2.58□□□□□ -2
TRAV11-201ENST00000539512 TPRP12270 2363 aaKnown RBP2.58□□□□□ -2
TRAV11-201ENST00000539512 CD163L1Q9NR16 1453 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 ZFYVE26Q68DK2 2539 aa2.58□□□□□ -2
TRAV11-201ENST00000539512 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 PPLO60437 1756 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 RGPD5Q99666 1765 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 TAF1LQ8IZX4 1826 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 NAV2Q8IVL1 2488 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 ADAP1O75689 374 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 LRRC26Q2I0M4 334 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 CLEC6AQ6EIG7 209 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 LCN8Q6JVE9 175 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 AGTRAPQ6RW13 159 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 SLC35F6Q8N357 371 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 OR7G1Q8NGA0 311 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 Q8WTZ3 238 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 FGF13Q92913 245 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 C16orf95Q9H693 158 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 SLC2A9Q9NRM0 540 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 ASPMQ8IZT6 3477 aa2.57□□□□□ -2
TRAV11-201ENST00000539512 USP24Q9UPU5 2620 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 RBBP6Q7Z6E9 1792 aaKnown RBP2.56□□□□□ -2
TRAV11-201ENST00000539512 TRPM7Q96QT4 1865 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 IGHV1-69P01742 117 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 HPCAP84074 193 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 GNA12Q03113 381 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 TMEM267Q0VDI3 215 aaPredicted RBP2.56□□□□□ -2
TRAV11-201ENST00000539512 PCOTHQ58A44 107 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 HSP90B2PQ58FF3 399 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 TIPINQ9BVW5 301 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 NRBP2Q9NSY0 501 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 KIF24Q5T7B8 1368 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 KTN1Q86UP2 1357 aaKnown RBP2.56□□□□□ -2
TRAV11-201ENST00000539512 RIC1Q4ADV7 1423 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 WDR87Q6ZQQ6 2873 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 COL4A6Q14031 1691 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 SLX4Q8IY92 1834 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 FER1L6Q2WGJ9 1857 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 NUP205Q92621 2012 aa2.56□□□□□ -2
TRAV11-201ENST00000539512 PTPRZ1P23471 2315 aaPredicted RBP2.56□□□□□ -2
TRAV11-201ENST00000539512 IGHV3-15A0A0B4J1V0 119 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms