RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CLVS1Q8IUQ0 354 aaPredicted RBP12.07□□□□□ -0.48
CIT-210ENST00000539413 OR6F1Q8NGZ6 308 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 OR51H1Q8NH63 302 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 EXTL2Q9UBQ6 330 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 TGP01266 2768 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 A0A0G2JLM5 398 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 ANKRD34BA5PLL1 514 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 E7EUB6 86 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 PRH1P02810 166 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 MYOD1P15172 320 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 RCVRNP35243 200 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 BORCS5Q969J3 196 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
CIT-210ENST00000539413 ADAM30Q9UKF2 790 aa12.06□□□□□ -0.48
CIT-210ENST00000539413 A0A1B0GW64 132 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 TEX22C9J3V5 150 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 PGLYRP1O75594 196 aaPredicted RBP12.05□□□□□ -0.48
CIT-210ENST00000539413 HPRT1P00492 218 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 RLN1P04808 185 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
CIT-210ENST00000539413 ECI1P42126 302 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
CIT-210ENST00000539413 TAS2R31P59538 309 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 TSPAN5P62079 268 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 ZNF45Q02386 682 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 FYTTD1Q96QD9 318 aaKnown RBP12.05□□□□□ -0.48
CIT-210ENST00000539413 MIXL1Q9H2W2 232 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
CIT-210ENST00000539413 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
CIT-210ENST00000539413 S1PR2O95136 353 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 NQO2P16083 231 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 MAS1LP35410 378 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 INSL3P51460 131 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
CIT-210ENST00000539413 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 ZNF343Q6P1L6 599 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 C19orf35Q6ZS72 473 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 USMG5Q96IX5 58 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 PRR25Q96S07 402 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 ABHD1Q96SE0 405 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 AIFM2Q9BRQ8 373 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 PLEKHA2Q9HB19 425 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 HRASLSQ9HDD0 168 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 KLK11Q9UBX7 282 aa12.04□□□□□ -0.48
CIT-210ENST00000539413 TRAV3A0A0B4J244 114 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 M0QYG6 137 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 GPR31O00270 319 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 CTDSP2O14595 271 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 RGS5O15539 181 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 SAP30O75446 220 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 TRBV12-3P01733 135 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 ZNF735P0CB33 412 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 RPA2P15927 270 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 HLA-GP17693 338 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 F2RP25116 425 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 RHOGP84095 191 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 OR52I2Q8NH67 350 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 OR4A5Q8NH83 315 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 CD300LFQ8TDQ1 290 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
CIT-210ENST00000539413 PEF1Q9UBV8 284 aaKnown RBP12.03□□□□□ -0.48
CIT-210ENST00000539413 TRBV9A0A0B4J1U6 114 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 CGB1A6NKQ9 187 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 UPK2O00526 184 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 AREGP15514 252 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 ZP3P21754 424 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 RPL5P46777 297 aaKnown RBP12.02□□□□□ -0.49
CIT-210ENST00000539413 TMBIM6P55061 237 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 PHLDA2Q53GA4 152 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 VAX1Q5SQQ9 334 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 SLC25A42Q86VD7 318 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 DMBX1Q8NFW5 382 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 DYNC2LI1Q8TCX1 351 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 FCAMRQ8WWV6 532 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 DGCR14Q96DF8 476 aaKnown RBP12.02□□□□□ -0.49
CIT-210ENST00000539413 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 TMEM140Q9NV12 185 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 COMMD9Q9P000 198 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
CIT-210ENST00000539413 ZNF257Q9Y2Q1 563 aa12.02□□□□□ -0.49
CIT-210ENST00000539413 DPPA5A6NC42 116 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 NPIPB5A8MRT5 1133 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 OR2J3O76001 311 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 LPAR6P43657 344 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 EXOSC2Q13868 293 aaKnown RBP12.01□□□□□ -0.49
CIT-210ENST00000539413 ZNF585BQ52M93 769 aa12.01□□□□□ -0.49
CIT-210ENST00000539413 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms