RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 CLDN23Q96B33 292 aa10.41□□□□□ -0.74
USP3-203ENST00000538686 BORCS8Q96FH0 119 aa10.41□□□□□ -0.74
USP3-203ENST00000538686 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
USP3-203ENST00000538686 TECRQ9NZ01 308 aaKnown RBP10.41□□□□□ -0.74
USP3-203ENST00000538686 C19orf25Q9UFG5 118 aaPredicted RBP10.41□□□□□ -0.74
USP3-203ENST00000538686 HSPB8Q9UJY1 196 aa10.41□□□□□ -0.74
USP3-203ENST00000538686 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
USP3-203ENST00000538686 CLPSP04118 112 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 CCL2P13500 99 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 P2RY2P41231 377 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 GAGE5Q13069 117 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 GAGE6Q13070 117 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 GPM6BQ13491 265 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 TIGITQ495A1 244 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 DMRTC1Q5HYR2 192 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 FAM120AOSQ5T036 256 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 PARM1Q6UWI2 310 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 ADAMTSL5Q6ZMM2 481 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 RD3Q7Z3Z2 195 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
USP3-203ENST00000538686 H1FXQ92522 213 aaKnown RBP10.4□□□□□ -0.74
USP3-203ENST00000538686 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
USP3-203ENST00000538686 A0A1W2PRU2 124 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 SPINK4O60575 86 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 IGKV1-5P01602 117 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 CA3P07451 260 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 IGFBP2P18065 325 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 CCL14Q16627 93 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 TMEM177Q53S58 311 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 TTC9CQ8N5M4 171 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 OR51H1Q8NH63 302 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 OR1L1Q8NH94 360 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 GALMQ96C23 342 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 NXF5Q9H1B4 397 aaKnown RBP10.4□□□□□ -0.75
USP3-203ENST00000538686 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.75
USP3-203ENST00000538686 ALKBH4Q9NXW9 302 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 CLCF1Q9UBD9 225 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 CYSLTR1Q9Y271 337 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 RALGAPA1Q6GYQ0 2036 aa10.4□□□□□ -0.75
USP3-203ENST00000538686 TDRD6O60522 2096 aaKnown RBP10.39□□□□□ -0.75
USP3-203ENST00000538686 A0A0J9YY10 115 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 A0A1B0GX78 115 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 PMS2P5A8MQ11 134 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 CEACAM5P06731 702 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 UQCRFS1P47985 274 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 PLCXD2Q0VAA5 305 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 TMEM164Q5U3C3 297 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 GPHA2Q96T91 129 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 ATP23Q9Y6H3 246 aa10.39□□□□□ -0.75
USP3-203ENST00000538686 AGFG2O95081 481 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 IL11P20809 199 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 OPRK1P41145 380 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 HERV-K104P63124 156 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 SLC23A3Q6PIS1 610 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 DHRS13Q6UX07 377 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 KIR3DL3Q8N743 410 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 GJC3Q8NFK1 279 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 ST8SIA1Q92185 356 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 VGLL1Q99990 258 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 ERRFI1Q9UJM3 462 aaPredicted RBP10.38□□□□□ -0.75
USP3-203ENST00000538686 CCL26Q9Y258 94 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 WDR83OSQ9Y284 106 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 A0A0C4DFX4 3053 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 HELTA6NFD8 242 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 E9PLN8 166 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 F5H5K5 113 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 IGKV1-39P01597 117 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 IGKV1D-39P04432 117 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CT45A6P0DMU7 189 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CT45A5P0DMU8 189 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CT45A7P0DMV0 189 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 FBLP22087 321 aaKnown RBP10.38□□□□□ -0.75
USP3-203ENST00000538686 CCL15Q16663 113 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 IZUMO4Q1ZYL8 232 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CENPWQ5EE01 88 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 ATP5L2Q7Z4Y8 100 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
USP3-203ENST00000538686 SCTP09683 121 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 MGST1P10620 155 aaKnown RBP10.37□□□□□ -0.75
USP3-203ENST00000538686 DRD3P35462 400 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 ZNF585BQ52M93 769 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
USP3-203ENST00000538686 DOLPP1Q86YN1 238 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 RAX2Q96IS3 184 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 EMC6Q9BV81 110 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 METTL7AQ9H8H3 244 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 MTCH1Q9NZJ7 389 aa10.37□□□□□ -0.75
USP3-203ENST00000538686 TNFRSF18Q9Y5U5 241 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms