RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MRPS16Q9Y3D3 137 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 COX11Q9Y6N1 276 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 NCKAP5O14513 1909 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 ZNF503-AS2A6NEH8 195 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 AQP7O14520 342 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 ZNF83P51522 516 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 MORN2Q502X0 79 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 TREML4Q6UXN2 200 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 Q8IYB0 196 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 RCHY1Q96PM5 261 aa15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 MRPS17Q9Y2R5 130 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-207ENST00000538548 A0A1W2PQM1 296 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 C3orf79P0CE67 100 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 CX3CL1P78423 397 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 SPATA46Q5T0L3 261 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 TAAR6Q96RI8 345 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 P04436 131 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 RFPL3SP0C7P2 107 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 CA6P23280 308 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 GCHFRP30047 84 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 TSPOP30536 169 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 WIPI1Q5MNZ9 446 aaPredicted RBP15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 OR2D3Q8NGH3 330 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 GALMQ96C23 342 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 UHRF2Q96PU4 802 aa15.49■□□□□ 0.07
SFSWAP-207ENST00000538548 C19orf35Q6ZS72 473 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 WDR31Q8NA23 367 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 MGST2Q99735 147 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 GGTLC1Q9BX51 225 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 SLC35D1Q9NTN3 355 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 BET1LQ9NYM9 111 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 SIT1Q9Y3P8 196 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 MED12LQ86YW9 2145 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 TRAV34A0A0B4J273 112 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 CDIPTO14735 213 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 MIC13Q5XKP0 118 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 TMEM136Q6ZRR5 245 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 NIT1Q86X76 327 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 DEPPQ9NTK1 212 aa15.48■□□□□ 0.07
SFSWAP-207ENST00000538548 IGKV3D-15A0A087WSY6 115 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 OR10J4P0C629 311 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 ERVK11-1P61568 191 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 RPP30P78346 268 aaKnown RBP15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 GUSBP11Q6P575 273 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 ALKBH7Q9BT30 221 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 UNQ5815/PRO19632Q6UWF5 114 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 LYG1Q8N1E2 194 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 IGHV2OR16-5A0A0B4J2B6 119 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 MT-CO2P00403 227 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 ARR3P36575 388 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 CXCL12P48061 93 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 HINT1P49773 126 aaPredicted RBP15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 CLDN18P56856 261 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 ZNF146Q15072 292 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 OR5B3Q8NH48 314 aa15.47■□□□□ 0.07
SFSWAP-207ENST00000538548 CEP192Q8TEP8 1941 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 LOC105371242A0A075B767 164 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 C12orf77C9JDV5 145 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 GFRA1P56159 465 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 TMPRSS3P57727 454 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 PLP2Q04941 152 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 KIAA1644Q3SXP7 199 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 SPEM1Q8N4L4 309 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 OR52L2PQ8NGH6 319 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 OCIAD1Q9NX40 245 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 POLDIP2Q9Y2S7 368 aa15.46■□□□□ 0.07
SFSWAP-207ENST00000538548 SRIP30626 198 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 FOXG1P55316 489 aaPredicted RBP15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 ZXDAP98168 799 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 PMCHL1Q16048 86 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 IGFBP7Q16270 282 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 AARDQ4LEZ3 155 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 NINJ1Q92982 152 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 BORCS7Q96B45 105 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 RTL8AQ9BWD3 113 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 TECTAO75443 2155 aa15.46■□□□□ 0.06
SFSWAP-207ENST00000538548 KMT2EQ8IZD2 1858 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 IGHV2-26A0A0B4J1V2 119 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 TMEM30CPA0ZSE6 113 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 K7ESF4 209 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 CA2P00918 260 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 AREGP15514 252 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 CEACAM8P31997 349 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 CDC42EP3Q9UKI2 254 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 IGHV2-70DA0A0C4DH43 119 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 BMPR1BO00238 502 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 KLF7O75840 302 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 HLA-DQA1P01909 254 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 GNG4P50150 75 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 Q6ZVH6 145 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 SCCPDHQ8NBX0 429 aa15.45■□□□□ 0.06
SFSWAP-207ENST00000538548 LINC00473A8K010 186 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 SPINK4O60575 86 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 NXPH2O95156 264 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 RHOBP62745 196 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 STUMQ69YW2 141 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 FAM53AQ6NSI3 398 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 WDR86Q86TI4 376 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms