RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 BLNKQ8WV28 456 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SRSF12Q8WXF0 261 aaKnown RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 TMEM208Q9BTX3 173 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 PSENENQ9NZ42 101 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 FBXL7Q9UJT9 491 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 FBXO7Q9Y3I1 522 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 ZNF785A8K8V0 405 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 OR2A4O95047 310 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 HOXB4P17483 251 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 MC5RP33032 325 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 NDPQ00604 133 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 LOXL1Q08397 574 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 ZFP69Q49AA0 526 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 C11orf87Q6NUJ2 197 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 C8orf86Q6ZUL3 223 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SLC38A6Q8IZM9 456 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 ARRDC1Q8N5I2 433 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 ZNF383Q8NA42 475 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 TMEM68Q96MH6 324 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 OR2A7Q96R45 310 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 ALX4Q9H161 411 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 RANGRFQ9HD47 186 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 TAS2R3Q9NYW6 316 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 GAB2Q9UQC2 676 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 UBE2L5PA0A1B0GUS4 154 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SULT1A3P0DMM9 295 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SULT1A4P0DMN0 295 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 RAP2BP61225 183 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 RHOGP84095 191 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 OR4B1Q8NGF8 309 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 ARPC1AQ92747 370 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 NAA60Q9H7X0 242 aa5.84□□□□□ -1.47
MSH6-209ENST00000538136 SEBOXQ9HB31 216 aaPredicted RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 MBNL3Q9NUK0 354 aaKnown RBP5.84□□□□□ -1.47
MSH6-209ENST00000538136 ATP6V0E1O15342 81 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 CD55P08174 381 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 AREGP15514 252 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 CD33P20138 364 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 HOXD3P31249 432 aaPredicted RBP5.84□□□□□ -1.48
MSH6-209ENST00000538136 RND2P52198 227 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 ERVK11-1P61568 191 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 OR4A47Q6IF82 309 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 OR8H1Q8NGG4 311 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 OR1B1Q8NGR6 318 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 OR1L8Q8NGR8 309 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 SAT2Q96F10 170 aaPredicted RBP5.84□□□□□ -1.48
MSH6-209ENST00000538136 SOSTQ9BQB4 213 aa5.84□□□□□ -1.48
MSH6-209ENST00000538136 QTRT1Q9BXR0 403 aaKnown RBP5.84□□□□□ -1.48
MSH6-209ENST00000538136 ZNF430Q9H8G1 570 aaPredicted RBP5.84□□□□□ -1.48
MSH6-209ENST00000538136 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.84□□□□□ -1.48
MSH6-209ENST00000538136 ST8SIA3O43173 380 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 SC5DO75845 299 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 SUB1P53999 127 aaKnown RBP eCLIP5.83□□□□□ -1.486e-8■■■□□ 14.9
MSH6-209ENST00000538136 SYNJ2BPP57105 145 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RAB11AP62491 216 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 C11orf91Q3C1V1 193 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 TMEM128Q5BJH2 165 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 OR8I2Q8N0Y5 310 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 ZNF645Q8N7E2 425 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 OR4P4Q8NGL7 312 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 MALSU1Q96EH3 234 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 SGK494Q96LW2 274 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 C1orf147Q96MC9 270 aaPredicted RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 SLC25A21Q9BQT8 299 aaPredicted RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 FOXA2Q9Y261 457 aaPredicted RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 K7EPK0 472 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 OR7C2O60412 319 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 VENTXO95231 258 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 ECI1P42126 302 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RAB32Q13637 225 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 IL34Q6ZMJ4 242 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 AKAP14Q86UN6 197 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 CDH26Q8IXH8 852 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 MRPL41Q8IXM3 137 aaKnown RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 FAM71E2Q8N5Q1 922 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 TMEM229BQ8NBD8 167 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RBPMSQ93062 196 aaKnown RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 NTNG2Q96CW9 530 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RCC2Q9P258 522 aaKnown RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 RABL2BQ9UNT1 228 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 LHBP01229 141 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 FAM157CP0CG43 387 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 CT45A6P0DMU7 189 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 CT45A5P0DMU8 189 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 CT45A7P0DMV0 189 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 TAS2R31P59538 309 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RBPMS2Q6ZRY4 209 aaKnown RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 CCDC190Q86UF4 302 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 TEX29Q8N6K0 151 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 OR4F5Q8NH21 305 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 VSTM2AQ8TAG5 236 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 THYN1Q9P016 225 aa5.83□□□□□ -1.48
MSH6-209ENST00000538136 RCL1Q9Y2P8 373 aaKnown RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 RAI1Q7Z5J4 1906 aaPredicted RBP5.83□□□□□ -1.48
MSH6-209ENST00000538136 A0A1W2PPV4 95 aa5.82□□□□□ -1.48
MSH6-209ENST00000538136 AP4M1O00189 453 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms