RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-210ENST00000538120 OR2D2Q9H210 308 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 SIRT7Q9NRC8 400 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 RPRMQ9NS64 109 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 RNF7Q9UBF6 113 aa8.9□□□□□ -0.99
CLIP1-210ENST00000538120 RP1L1Q8IWN7 2480 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-210ENST00000538120 SLC31A2O15432 143 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 CYB5R3P00387 301 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-210ENST00000538120 CD55P08174 381 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 OR4A8P0C604 315 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 DUX4L9Q6RFH8 374 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-210ENST00000538120 Q8TCH9 128 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 RBMXL1Q96E39 390 aaKnown RBP8.89□□□□□ -0.99
CLIP1-210ENST00000538120 LIN7CQ9NUP9 197 aaKnown RBP8.89□□□□□ -0.99
CLIP1-210ENST00000538120 GFOD1Q9NXC2 390 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 DEFB108AA8MXU0 73 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 CGB3P0DN86 165 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 CGB7P0DN87 165 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 MMP9P14780 707 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 ARL16Q0P5N6 197 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 HNF4GQ14541 408 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 KIAA2026Q5HYC2 2103 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 STUMQ69YW2 141 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 ZNF808Q8N4W9 903 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-210ENST00000538120 AGMATQ9BSE5 352 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 RNF24Q9Y225 148 aa8.89□□□□□ -0.99
CLIP1-210ENST00000538120 PHOX2AO14813 284 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 SPINT2O43291 252 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 RAMP3O60896 148 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 GZMHP20718 246 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 BAXQ07812 192 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 MSMO1Q15800 293 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 SDSLQ96GA7 329 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 TRGV8A0A0C4DH27 118 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 A0A1W2PN81 502 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 ADH4P08319 380 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 IAPPP10997 89 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 CHRNA7P36544 502 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 LINC00205P59089 165 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 DMRTC2Q8IXT2 367 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-210ENST00000538120 ZCCHC24Q8N2G6 241 aaKnown RBP8.88□□□□□ -0.99
CLIP1-210ENST00000538120 RNASE11Q8TAA1 199 aaKnown RBP8.88□□□□□ -0.99
CLIP1-210ENST00000538120 CACNG5Q9UF02 275 aa8.88□□□□□ -0.99
CLIP1-210ENST00000538120 MAP1BP46821 2468 aaKnown RBP8.87□□□□□ -0.99
CLIP1-210ENST00000538120 RNF212BA8MTL3 300 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 C17orf100A8MU93 164 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 C17orf98A8MV24 154 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 PROP1O75360 226 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 P0C879 139 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 BCL2P10415 239 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 LOXL3P58215 753 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 LTC4SQ16873 150 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 UTF1Q5T230 341 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 BTNL3Q6UXE8 466 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 SSX8Q7RTT4 187 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 C1orf87Q8N0U7 546 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 FGFRL1Q8N441 504 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-210ENST00000538120 GAFA1Q96PS6 74 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 PSG11Q9UQ72 335 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 SHISA9B4DS77 424 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 CLDN34H7C241 214 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 F2RL2O00254 374 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 HBE1P02100 147 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 CCL8P80075 99 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 C17orf58Q2M2W7 97 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 MORN2Q502X0 79 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 TEX36Q5VZQ5 186 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 WDR25Q64LD2 544 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-210ENST00000538120 DEFB108BQ8NET1 73 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 OR13D1Q8NGV5 346 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 CA5BP1Q8WTZ4 195 aa8.87□□□□□ -0.99
CLIP1-210ENST00000538120 TLN1Q9Y490 2541 aaKnown RBP8.86□□□□□ -0.99
CLIP1-210ENST00000538120 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-210ENST00000538120 LINC00473A8K010 186 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 CA7P43166 264 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 RND2P52198 227 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 EDDM3BP56851 147 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 KLRB1Q12918 225 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 CLEC12BQ2HXU8 276 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 ZNF788Q6ZQV5 615 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 TCF23Q7RTU1 214 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 NECAP1Q8NC96 275 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 NEUROG1Q92886 237 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 PLPPR2Q96GM1 343 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 CCL13Q99616 98 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 SDF2L1Q9HCN8 221 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 CISD1Q9NZ45 108 aaKnown RBP8.86□□□□□ -0.99
CLIP1-210ENST00000538120 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
CLIP1-210ENST00000538120 IGF2RP11717 2491 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 CEBPZOSA8MTT3 80 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 E7EQL1 145 aa8.86□□□□□ -0.99
CLIP1-210ENST00000538120 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms