RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
SYNE1-235ENST00000537033 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 SSX5O60225 188 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 GGCTO75223 188 aaKnown RBP10.56□□□□□ -0.72
SYNE1-235ENST00000537033 IGLV2-14P01704 120 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 SCAND1P57086 179 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
SYNE1-235ENST00000537033 MFSD4AQ8N468 514 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 FBXL7Q9UJT9 491 aa10.56□□□□□ -0.72
SYNE1-235ENST00000537033 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 HIST1H1BP16401 226 aaKnown RBP10.55□□□□□ -0.72
SYNE1-235ENST00000537033 MECP2P51608 486 aaKnown RBP10.55□□□□□ -0.72
SYNE1-235ENST00000537033 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
SYNE1-235ENST00000537033 MXD1Q05195 221 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 GUCA2BQ16661 112 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 SSX9Q7RTT3 188 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 PUSL1Q8N0Z8 303 aaKnown RBP10.55□□□□□ -0.72
SYNE1-235ENST00000537033 BEST4Q8NFU0 473 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 OR13F1Q8NGS4 319 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 SECTM1Q8WVN6 248 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 NEURL2Q9BR09 285 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 SLC2A9Q9NRM0 540 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
SYNE1-235ENST00000537033 CEPT1Q9Y6K0 416 aa10.55□□□□□ -0.72
SYNE1-235ENST00000537033 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 A0A0A6YYH2 397 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 LCE6AA0A183 80 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 A6NJ64 397 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 LGALS9O00182 355 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 TNFSF12O43508 249 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 ZNF735P0CB33 412 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 DEFA4P12838 97 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 FCGR2CP31995 323 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 SDC2P34741 201 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 ARL3P36405 182 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 CATR1Q13166 79 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 EIF4EBP1Q13541 118 aaPredicted RBP10.54□□□□□ -0.72
SYNE1-235ENST00000537033 MSMO1Q15800 293 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 IDNKQ5T6J7 187 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 OR4A5Q8NH83 315 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 YTHDF1Q9BYJ9 559 aaKnown RBP10.54□□□□□ -0.72
SYNE1-235ENST00000537033 HRASLSQ9HDD0 168 aa10.54□□□□□ -0.72
SYNE1-235ENST00000537033 LOC100506127A0A0U1RQW1 187 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 OR2C1O95371 312 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 ATP6V1G2O95670 118 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
SYNE1-235ENST00000537033 IL6RP08887 468 aaPredicted RBP10.53□□□□□ -0.72
SYNE1-235ENST00000537033 FOLR2P14207 255 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 HLA-GP17693 338 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 PSMB6P28072 239 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 DEFB114Q30KQ6 69 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 SPAG16Q8N0X2 631 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 ZBTB34Q8NCN2 500 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 IL17DQ8TAD2 202 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 DIABLOQ9NR28 239 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 BET1LQ9NYM9 111 aa10.53□□□□□ -0.72
SYNE1-235ENST00000537033 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.73
SYNE1-235ENST00000537033 PPYP01298 95 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 IGHV3-23P01764 117 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 CRYGCP07315 174 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 AREGP15514 252 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 FXYD4P59646 89 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 TIMM50Q3ZCQ8 353 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 FAM106AQ4KMX7 169 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 OR4A47Q6IF82 309 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 ADAMTSL5Q6ZMM2 481 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 HOGA1Q86XE5 327 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 GPHB5Q86YW7 130 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 GVQW1Q8N7I0 195 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 BORCS5Q969J3 196 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 SLC25A38Q96DW6 304 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 CXorf58Q96LI9 332 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 GPHA2Q96T91 129 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 SLC5A7Q9GZV3 580 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 ZC4H2Q9NQZ6 224 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
SYNE1-235ENST00000537033 TRBV7-1A0A0A6YYK4 115 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 E7EUB6 86 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 SULT1C2O00338 296 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 CYB5BO43169 146 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 NDUFB8O95169 186 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 REG1AP05451 166 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 CD7P09564 240 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 CLEC2LP0C7M8 214 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 NQO2P16083 231 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 CTRB1P17538 263 aa10.51□□□□□ -0.73
SYNE1-235ENST00000537033 CBX5P45973 191 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms