RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PRR20CP86479 221 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 PRR20DP86480 221 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 PRR20BP86481 221 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 PRR20AP86496 221 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 CATR1Q13166 79 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 IGFBP7Q16270 282 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 MAJINQ3KP22 176 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 FAM120AOSQ5T036 256 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 SPATA31B1PQ5VZV4 182 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 SLC35E4Q6ICL7 350 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 FAM53AQ6NSI3 398 aaPredicted RBP5.74□□□□□ -1.49
CPSF7-215ENST00000536145 EBLN2Q6P2I7 272 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 TMPRSS7Q7RTY8 843 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 TIPARPQ7Z3E1 657 aaKnown RBP5.74□□□□□ -1.49
CPSF7-215ENST00000536145 SPATA12Q7Z6I5 190 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 YRDCQ86U90 279 aaKnown RBP5.74□□□□□ -1.49
CPSF7-215ENST00000536145 VASH2Q86V25 355 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 RPS19BP1Q86WX3 136 aaKnown RBP5.74□□□□□ -1.49
CPSF7-215ENST00000536145 GCNT2Q8N0V5 402 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 ZNF439Q8NDP4 499 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 OR52L2PQ8NGH6 319 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 OR10D3Q8NH80 312 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 UBALD1Q8TB05 177 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 C18orf32Q8TCD1 76 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 Q8TCH9 128 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 NEUROG1Q92886 237 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 LOXL4Q96JB6 756 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 IGF2BP2-AS1Q96M15 143 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 FAM103A1Q9BTL3 118 aaKnown RBP5.74□□□□□ -1.49
CPSF7-215ENST00000536145 OR2D2Q9H210 308 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 WDR54Q9H977 334 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 DEPPQ9NTK1 212 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 TRAPPC2LQ9UL33 140 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 U3KQA8 63 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 EML6Q6ZMW3 1958 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 GTF3C1Q12789 2109 aa5.74□□□□□ -1.49
CPSF7-215ENST00000536145 A0A1W2PQM1 296 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 ANKRD30BLA7E2S9 258 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 ZNF891A8MT65 544 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-215ENST00000536145 C12orf77C9JDV5 145 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 FNDC10F2Z333 226 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 GFRA3O60609 400 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 PROP1O75360 226 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 FOXH1O75593 365 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 CGAP01215 116 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 IGLL1P15814 213 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 PMCHP20382 165 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 CA6P23280 308 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 COL8A2P25067 703 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 SRIP30626 198 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 LTBRP36941 435 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 REG1BP48304 166 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 BPIFB3P59826 476 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 EFNB3Q15768 340 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 ZNF766Q5HY98 468 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 GDF5OSQ5U4N7 250 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 STUMQ69YW2 141 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 LCN12Q6JVE5 192 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 VWA1Q6PCB0 445 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 RASL11AQ6T310 242 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 FAM214BQ7L5A3 538 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 H2BFWTQ7Z2G1 175 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 DEFB123Q8N688 67 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 SCCPDHQ8NBX0 429 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 TSTD1Q8NFU3 115 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 ZNF503Q96F45 646 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 PHF7Q9BWX1 381 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-215ENST00000536145 TECRQ9NZ01 308 aaKnown RBP5.73□□□□□ -1.49
CPSF7-215ENST00000536145 NAT8BQ9UHF3 227 aa5.73□□□□□ -1.49
CPSF7-215ENST00000536145 RBM7Q9Y580 266 aaKnown RBP5.73□□□□□ -1.49
CPSF7-215ENST00000536145 TRAV34A0A0B4J273 112 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 TRGV8A0A0C4DH27 118 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 IGHV5-10-1A0A0J9YXX1 117 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 TMEM30CPA0ZSE6 113 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 C5orf49A4QMS7 147 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 LINC00473A8K010 186 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 GDF9O60383 454 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 RFPL3SP0C7P2 107 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 CCL2P13500 99 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 ARR3P36575 388 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 RPL19P84098 196 aaKnown RBP5.72□□□□□ -1.49
CPSF7-215ENST00000536145 HTD2P86397 168 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 TNXAQ16473 311 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 SPINK9Q5DT21 86 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 CENPWQ5EE01 88 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 WIPI1Q5MNZ9 446 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-215ENST00000536145 FAM231DQ6ZW35 169 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 SPACA3Q8IXA5 215 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 Q8IYB0 196 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-215ENST00000536145 SLC24A4Q8NFF2 622 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 ABHD3Q8WU67 409 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 FAM122AQ96E09 287 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 COQ2Q96H96 371 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 HSD17B10Q99714 261 aaKnown RBP5.72□□□□□ -1.49
CPSF7-215ENST00000536145 COMMD5Q9GZQ3 224 aa5.72□□□□□ -1.49
CPSF7-215ENST00000536145 WNT10AQ9GZT5 417 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms