RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ZADH2Q8N4Q0 377 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 OR2T10Q8NGZ9 312 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 OR4S2Q8NH73 311 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 HIST1H2BLQ99880 126 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 PCGF1Q9BSM1 259 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 FAM234AQ9H0X4 552 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 TRGV8A0A0C4DH27 118 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 GGCTO75223 188 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 COA6Q5JTJ3 125 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 FAM209BQ5JX69 171 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 CST9LP1Q5W188 147 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 PACRGQ96M98 296 aaPredicted RBP13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-202ENST00000535997 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 F6UZH7 168 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 M0R1B8 84 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 TYMSP04818 313 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 GATA4P43694 442 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 IGF2-ASQ6U949 168 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 LINC01551Q86U37 167 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 MS4A5Q9H3V2 200 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 TCF19Q9Y242 345 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 CFAP47Q6ZTR5 3102 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 A0A1W2PPQ1 181 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 IGHV3-7P01780 117 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 STAG3L2P0CL84 134 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 STAG3L3P0CL85 134 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 GNB1P62873 340 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 C17orf58Q2M2W7 97 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 SPRNQ5BIV9 151 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 CT45A1Q5HYN5 189 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 KCNIP4Q6PIL6 250 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 ZNF474Q6S9Z5 364 aaPredicted RBP13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 CT45A3Q8NHU0 189 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 ACY3Q96HD9 319 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 MGST2Q99735 147 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 ELOVL1Q9BW60 279 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 PATZ1Q9HBE1 687 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-202ENST00000535997 EP300Q09472 2414 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 SPRY3O43610 288 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 NDUFB4O95168 129 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 CXorf1O96002 111 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 LCN2P80188 198 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 ALKBH2Q6NS38 261 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 CDPF1Q6NVV7 123 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 C1orf229Q6ZS94 237 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 CISD2Q8N5K1 135 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 FAM222BQ8WU58 562 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 RHOVQ96L33 236 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 GFOD1Q9NXC2 390 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 PXMP4Q9Y6I8 212 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 C15orf61A6NNL5 157 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 SLC31A2O15432 143 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 UBE2G2P60604 165 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 HSPE1P61604 102 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 RNASEH2CQ8TDP1 164 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 BTF3L4Q96K17 158 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 IMMP2LQ96T52 175 aa13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-202ENST00000535997 DSCAMO60469 2012 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 ATP5G3P48201 142 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 THBS3P49746 956 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 IGFL3Q6UXB1 125 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 SDSLQ96GA7 329 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 ADTRPQ96IZ2 230 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 TMEM14BQ9NUH8 114 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.29
CHMP1A-202ENST00000535997 TRGV10A0A0A0MS01 117 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 TRBV23-1A0A0A0MS06 115 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 PDLIM4P50479 330 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 MIC13Q5XKP0 118 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 RNF7Q9UBF6 113 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 FOXA2Q9Y261 457 aaPredicted RBP13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 DVL1O14640 695 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 SELENOVP59797 346 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 FOXL1Q12952 345 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 CLEC12BQ2HXU8 276 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 OR4A47Q6IF82 309 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 TEPPQ6URK8 271 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 DSCAML1Q8TD84 2053 aa13.2□□□□□ -0.3
CHMP1A-202ENST00000535997 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms