RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 OR6C3Q9NZP0 311 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 TRAV39A0A0B4J263 110 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 C22orf46C9J442 243 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 SELENOVP59797 346 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 POU2AF1Q16633 256 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 SP6Q3SY56 376 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ABCA11PQ4W5N1 156 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ZNRF1Q8ND25 227 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 LY6G5BQ8NDX9 201 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 OR13D1Q8NGV5 346 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 RAB39BQ96DA2 213 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 GAL3ST2Q9H3Q3 398 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 CALYQ9NYX4 217 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 PLA2G2EQ9NZK7 142 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ZFHX3Q15911 3703 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 A0A1W2PPQ1 181 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 PHF1O43189 567 aaPredicted RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ZG16O60844 167 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 JTBO76095 146 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 RBP4P02753 201 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 MAS1LP35410 378 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 TFPI2P48307 235 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 FAM201AQ5SY85 155 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 Q6ZRM9 215 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 SLC25A48Q6ZT89 311 aaKnown RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 C1orf87Q8N0U7 546 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 MRGPRDQ8TDS7 321 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 DCTN5Q9BTE1 182 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 LIN7CQ9NUP9 197 aaKnown RBP6.57□□□□□ -1.36
COL21A1-212ENST00000535941 PPP1R3CQ9UQK1 317 aa6.57□□□□□ -1.36
COL21A1-212ENST00000535941 CACNA1DQ01668 2161 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 LINC00473A8K010 186 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 FAM90A26D6RGX4 464 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 H3BQ15 152 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 HSD17B6O14756 317 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 CLDN14O95500 239 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM50AO95807 157 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 MDKP21741 143 aaPredicted RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 ERVFRD-1P60508 538 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 IQCJQ1A5X6 159 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 IAH1Q2TAA2 248 aaPredicted RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF833PQ6ZTB9 187 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 ACTR3CQ9C0K3 210 aaPredicted RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 MS4A5Q9H3V2 200 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 PLEKHA2Q9HB19 425 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 DNAJC4Q9NNZ3 241 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 CLEC5AQ9NY25 188 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 KIAA2026Q5HYC2 2103 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 LRBAP50851 2863 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 IGHV3-64DA0A0J9YX35 117 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 C17orf98A8MV24 154 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 NDUFS8O00217 210 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 GCGP01275 180 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 EPHA1P21709 976 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 TAS2R30P59541 319 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 GPR157Q5UAW9 335 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 CMTM1Q8IZ96 169 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 PPP1R35Q8TAP8 253 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 KCNIP1Q9NZI2 227 aa6.56□□□□□ -1.36
COL21A1-212ENST00000535941 RPUSD1Q9UJJ7 312 aaKnown RBP6.56□□□□□ -1.36
COL21A1-212ENST00000535941 TRAV38-1A0A0B4J264 116 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 C20orf202A1L168 122 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 E5RGE8 158 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 OVOL3O00110 214 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 AMBPP02760 352 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 UQCRFS1P47985 274 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FHITP49789 147 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 VAMP2P63027 116 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 DLK1P80370 383 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 BTNL3Q6UXE8 466 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 ABHD5Q8WTS1 349 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 WFDC12Q8WWY7 111 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 ST6GALNAC6Q969X2 333 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 GPR146Q96CH1 333 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 HSD17B10Q99714 261 aaKnown RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 NIPSNAP3BQ9BS92 247 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 SAP30LQ9HAJ7 183 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 NSG2Q9Y328 171 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FAM90A27PA6NNH2 459 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 RNF212BA8MTL3 300 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM155Q4W5P6 130 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FGFRL1Q8N441 504 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FAM216BQ8N7L0 139 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 GINS3Q9BRX5 216 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 WFDC1Q9HC57 220 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 IDI2-AS1Q9NZ38 188 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 HSPB7Q9UBY9 170 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FBXL17Q9UF56 701 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms