RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 WDR25Q64LD2 544 aaPredicted RBP11□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF439Q8NDP4 499 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 RND1Q92730 232 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 GAB2Q9UQC2 676 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 MSRB2Q9Y3D2 182 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 TET2Q6N021 2002 aaPredicted RBP11□□□□□ -0.65
VPS33B-202ENST00000535906 C15orf62A8K5M9 175 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 CLDN34H7C241 214 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 CYB5BO43169 146 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 HOXA5P20719 270 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 CD81P60033 236 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 GNB2P62879 340 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
VPS33B-202ENST00000535906 NCMAPQ5T1S8 102 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 OR13D1Q8NGV5 346 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 DIRC2Q96SL1 478 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 RAB9BQ9NP90 201 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 IDI2-AS1Q9NZ38 188 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 ZZEF1O43149 2961 aa11□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF729A6NN14 1252 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-202ENST00000535906 FAM90A9PA6NNJ1 464 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 GNG10P50151 68 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 RELBQ01201 579 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 TLE1Q04724 770 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 LYG1Q8N1E2 194 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 OR10G9Q8NGN4 311 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 OR10G7Q8NGN6 311 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 LINC00574Q9H8X3 128 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 IGF2RP11717 2491 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 FCN3O75636 299 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 NDUFB7P17568 137 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-202ENST00000535906 TFF3Q07654 80 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 C1orf87Q8N0U7 546 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 CORO2AQ92828 525 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 CTDSP1Q9GZU7 261 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 SAP30LQ9HAJ7 183 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 NIT2Q9NQR4 276 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 TMEM140Q9NV12 185 aa10.99□□□□□ -0.65
VPS33B-202ENST00000535906 PSMB3P49720 205 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 SPCS3P61009 180 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ERVK-16P61578 105 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 MRPS11P82912 194 aaKnown RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 RBPJQ06330 500 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF383Q8NA42 475 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 NEUROG1Q92886 237 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 FAM210BQ96KR6 192 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ACTR3CQ9C0K3 210 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 DOK5Q9P104 306 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ZNRD1Q9P1U0 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BKO60814 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 YIF1AO95070 293 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BJP06899 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BOP23527 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BBP33778 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 KIR2DS2P43631 304 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 CDX1P47902 265 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BDP58876 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BCP62807 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST2H2BEQ16778 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 CYP2G1PQ6ZSU1 146 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 OR4S2Q8NH73 311 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 CCL17Q92583 94 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BHQ93079 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BNQ99877 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 HIST1H2BMQ99879 126 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 SMIM7Q9BQ49 75 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 VKORC1Q9BQB6 163 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 MANBALQ9NQG1 85 aa10.98□□□□□ -0.65
VPS33B-202ENST00000535906 SLC25A10Q9UBX3 287 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-202ENST00000535906 TRAV38-1A0A0B4J264 116 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 C17orf112F2Z3M2 114 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
VPS33B-202ENST00000535906 KBTBD11O94819 623 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 LY86O95711 162 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 TRGC2P03986 189 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 OPN1MWP04001 364 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 OPN1MW2P0DN77 364 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 OPN1MW3P0DN78 364 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 NDUFA6P56556 154 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 SSX8Q7RTT4 187 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 DMRTC2Q8IXT2 367 aaPredicted RBP10.97□□□□□ -0.65
VPS33B-202ENST00000535906 RPUSD1Q9UJJ7 312 aaKnown RBP10.97□□□□□ -0.65
VPS33B-202ENST00000535906 SPTA1P02549 2419 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 hADV38S2A0JD32 116 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 E7EQL1 145 aa10.97□□□□□ -0.65
VPS33B-202ENST00000535906 TMEM178BH3BS89 294 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms