RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 FCN1O00602 326 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 PDE6DO43924 150 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 PROP1O75360 226 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 CATR1Q13166 79 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 ZNF146Q15072 292 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 LEAP2Q969E1 77 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 MGST2Q99735 147 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 CACNA1GO43497 2377 aa11.15□□□□□ -0.63
HDAC4-214ENST00000535493 ABCA1O95477 2261 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 TMEM30CPA0ZSE6 113 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 CYC1P08574 325 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 MYOD1P15172 320 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 KRTDAPP60985 99 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 FOXF2Q12947 444 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 FOXL1Q12952 345 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 AGFG2O95081 481 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-214ENST00000535493 FXYD3Q14802 87 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 Q8TCH9 128 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 FAM173AQ9BQD7 235 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 POLDIP2Q9Y2S7 368 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
HDAC4-214ENST00000535493 SNURFLB1AK76 121 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 YPEL1O60688 119 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 SMPD2O60906 423 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 DCAF12Q5T6F0 453 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 ABHD17BQ5VST6 288 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 YPEL2Q96QA6 119 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 TNRC6BQ9UPQ9 1833 aaKnown RBP11.13□□□□□ -0.63
HDAC4-214ENST00000535493 A0A1B0GWJ7 208 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 TMPRSS2O15393 492 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 PRAMEF5Q5TYX0 476 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 PMS2CLQ68D20 193 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 OR1L6Q8NGR2 347 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 HINT2Q9BX68 163 aa11.13□□□□□ -0.63
HDAC4-214ENST00000535493 RAB29O14966 203 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 DLEU1O43261 78 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 DCAF10Q5QP82 559 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 DOLPP1Q86YN1 238 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 BCL2L2Q92843 193 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 LRFN3Q9BTN0 628 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 WISP2O76076 250 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 FABP6P51161 128 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 C6orf15Q6UXA7 325 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 Q6ZVH6 145 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 MOB3BQ86TA1 216 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 ST6GALNAC3Q8NDV1 305 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 C1orf159Q96HA4 380 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 CIB3Q96Q77 187 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-214ENST00000535493 GGTLC1Q9BX51 225 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
HDAC4-214ENST00000535493 CGAP01215 116 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
HDAC4-214ENST00000535493 BRS3P32247 399 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 TPPP2P59282 170 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 SSPNQ14714 243 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 MMDQ15546 238 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 OR5AU1Q8NGC0 362 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 OR4P4Q8NGL7 312 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 B4GALT7Q9UBV7 327 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 PMCHP20382 165 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 ARG2P78540 354 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
HDAC4-214ENST00000535493 C11orf53Q8IXP5 236 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
HDAC4-214ENST00000535493 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 M0R1X1 148 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-214ENST00000535493 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 YPEL3P61236 119 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-214ENST00000535493 FBXW9Q5XUX1 488 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-214ENST00000535493 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
HDAC4-214ENST00000535493 KLF14Q8TD94 323 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms