RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 KIR2DS1A0A191URI9 304 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 B4DSR2 109 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 TRDCB7Z8K6 153 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 ENSAO43768 121 aaKnown RBP10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 SCGB1D2O95969 90 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 PPIAL4GP0DN37 164 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 OR5H8P0DN80 308 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 KIR2DS4P43632 304 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 RND2P52198 227 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 PIGPP57054 158 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 LCN2P80188 198 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 BAXQ07812 192 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 KIR2DS1Q14954 304 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
SCARB1-204ENST00000535005 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
SCARB1-204ENST00000535005 MRGPRDQ8TDS7 321 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 Q8WTZ3 238 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 KCNIP1Q9NZI2 227 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 AKAP9Q99996 3911 aa10.09□□□□□ -0.79
SCARB1-204ENST00000535005 ABCA2Q9BZC7 2435 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 TRAV39A0A0B4J263 110 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 KBTBD11-OT1A0A1B0GTJ5 212 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 DUXBA0A1W2PPF3 345 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 C12orf77C9JDV5 145 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 NPIPB11E5RHQ5 1161 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 C15orf65H3BRN8 121 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 PPP1CCP36873 323 aaKnown RBP10.08□□□□□ -0.8
SCARB1-204ENST00000535005 DLX6P56179 175 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 SPCS3P61009 180 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 EWSR1Q01844 656 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■□□ 18.6
SCARB1-204ENST00000535005 C17orf58Q2M2W7 97 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM182Q6ZP80 229 aaPredicted RBP10.08□□□□□ -0.8
SCARB1-204ENST00000535005 ZNF429Q86V71 674 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 LILRB2Q8N423 598 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 KIR3DL3Q8N743 410 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 OR4D5Q8NGN0 318 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
SCARB1-204ENST00000535005 C11orf1Q9H5F2 150 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 ZNF286AQ9HBT8 521 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 RAB9BQ9NP90 201 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 PITPNC1Q9UKF7 332 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 DSCAML1Q8TD84 2053 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 TEX15Q9BXT5 2789 aa10.08□□□□□ -0.8
SCARB1-204ENST00000535005 IGKV1D-8A0A087WSZ0 117 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 IGHV2-70DA0A0C4DH43 119 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 C17orf98A8MV24 154 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 DIRAS3O95661 229 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 RBP4P02753 201 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 MSMBP08118 114 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 ZNF124Q15973 351 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM249Q2WGJ8 235 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 SPSB3Q6PJ21 355 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 C1orf122Q6ZSJ8 110 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 LINC01356Q8N9X3 169 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 BEND2Q8NDZ0 799 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 OR10A7Q8NGE5 316 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 OR2G3Q8NGZ4 309 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 GAL3ST2Q9H3Q3 398 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 PPP1R14DQ9NXH3 145 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 CALYQ9NYX4 217 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
SCARB1-204ENST00000535005 M0R1W7 72 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 F2RL2O00254 374 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
SCARB1-204ENST00000535005 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 FGF7P21781 194 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 RND3P61587 244 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 DLK1P80370 383 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 HNF4GQ14541 408 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 SSX2Q16385 188 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM30BQ3MIR4 351 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 OR2C3Q8N628 320 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 HSD17B11Q8NBQ5 300 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 PARP12Q9H0J9 701 aaKnown RBP10.07□□□□□ -0.8
SCARB1-204ENST00000535005 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
SCARB1-204ENST00000535005 MMP24Q9Y5R2 645 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 INSIG2Q9Y5U4 225 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 WSB1Q9Y6I7 421 aa10.07□□□□□ -0.8
SCARB1-204ENST00000535005 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 A0A087X0M5 115 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms