RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 WDR25Q64LD2 544 aaPredicted RBP10.93□□□□□ -0.66
BEST1-208ENST00000534553 OR5B3Q8NH48 314 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 ST6GALNAC6Q969X2 333 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 NARFLQ9H6Q4 476 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 ITPR1Q14643 2758 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 SMG1Q96Q15 3661 aaKnown RBP10.93□□□□□ -0.66
BEST1-208ENST00000534553 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 PPIAL4CA0A0B4J2A2 164 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 C17orf112F2Z3M2 114 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 F8W036 122 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 C1QL1O75973 258 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 IFNA10P01566 189 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 LIPFP07098 398 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 PPIAL4GP0DN37 164 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 IGFBP2P18065 325 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 TGIF2LXQ8IUE1 241 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 FLYWCH2Q96CP2 140 aaKnown RBP10.93□□□□□ -0.66
BEST1-208ENST00000534553 MRPL20Q9BYC9 149 aaKnown RBP10.93□□□□□ -0.66
BEST1-208ENST00000534553 KIAA1456Q9P272 454 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 WASHC3Q9Y3C0 194 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 FBXO7Q9Y3I1 522 aa10.93□□□□□ -0.66
BEST1-208ENST00000534553 AMMECR1Q9Y4X0 333 aaPredicted RBP10.93□□□□□ -0.66
BEST1-208ENST00000534553 DIDO1Q9BTC0 2240 aaKnown RBP10.92□□□□□ -0.66
BEST1-208ENST00000534553 UBE2L5PA0A1B0GUS4 154 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 C15orf62A8K5M9 175 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 UPK2O00526 184 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 FHITP49789 147 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 C11orf42Q8N5U0 333 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 LY6G5BQ8NDX9 201 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 LHX4Q969G2 390 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 HARBI1Q96MB7 349 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 NABP2Q9BQ15 211 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 PKD1L2Q7Z442 2459 aa10.92□□□□□ -0.66
BEST1-208ENST00000534553 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
BEST1-208ENST00000534553 H7C2Y5 167 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 KBTBD11O94819 623 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 IGKV1-16P04430 117 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 USF1P22415 310 aaPredicted RBP10.91□□□□□ -0.66
BEST1-208ENST00000534553 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 DEFA5Q01523 94 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 GUK1Q16774 197 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 TMEM41BQ5BJD5 291 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 CLEC7AQ9BXN2 247 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 PATZ1Q9HBE1 687 aaKnown RBP10.91□□□□□ -0.66
BEST1-208ENST00000534553 OR51B2Q9Y5P1 312 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 IGHV2-26A0A0B4J1V2 119 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 AGPAT2O15120 278 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 SNAPINO95295 136 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 IGLV1-47P01700 117 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 DLK1P80370 383 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 AVPI1Q5T686 147 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 EIF5A2Q9GZV4 153 aaKnown RBP10.91□□□□□ -0.66
BEST1-208ENST00000534553 PLEKHA3Q9HB20 300 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 KCNIP2Q9NS61 270 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 KPTNQ9Y664 436 aa10.91□□□□□ -0.66
BEST1-208ENST00000534553 COL6A6A6NMZ7 2263 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 RELNP78509 3460 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 TRAV3A0A0B4J244 114 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 A6NNC1 897 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 FNDC10F2Z333 226 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 INS-IGF2F8WCM5 200 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 M0R1W7 72 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 KALRNO60229 2985 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 F12P00748 615 aaPredicted RBP10.9□□□□□ -0.66
BEST1-208ENST00000534553 MDKP21741 143 aaPredicted RBP10.9□□□□□ -0.66
BEST1-208ENST00000534553 CD1BP29016 333 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 LGALS7P47929 136 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 SRSF3P84103 164 aaKnown RBP10.9□□□□□ -0.66
BEST1-208ENST00000534553 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 SLC24A4Q8NFF2 622 aa10.9□□□□□ -0.66
BEST1-208ENST00000534553 UNKLQ9H9P5 680 aaKnown RBP10.9□□□□□ -0.66
BEST1-208ENST00000534553 SFTA3P0C7M3 94 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 SAA1P0DJI8 122 aaPredicted RBP10.89□□□□□ -0.67
BEST1-208ENST00000534553 FGF7P21781 194 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 NPY1RP25929 384 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 EFNA4P52798 201 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 TMEM167AQ8TBQ9 72 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 SFT2D1Q8WV19 159 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 MBD3L1Q8WWY6 194 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 SSBP3Q9BWW4 388 aaPredicted RBP10.89□□□□□ -0.67
BEST1-208ENST00000534553 ZNRD1Q9P1U0 126 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 WDR83OSQ9Y284 106 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 HIVEP3Q5T1R4 2406 aa10.89□□□□□ -0.67
BEST1-208ENST00000534553 FAM157AC9JC47 383 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 GPR6P46095 362 aaPredicted RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 RPL8P62917 257 aaKnown RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 PMS2P11Q13670 270 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 VMA21Q3ZAQ7 101 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms