RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 ZNF45Q02386 682 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 EXOSC2Q13868 293 aaKnown RBP13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 IL34Q6ZMJ4 242 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 SSX9Q7RTT3 188 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 GIMAP1Q8WWP7 306 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 YIPF6Q96EC8 236 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 AIFM2Q9BRQ8 373 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
AP003555.3-201ENST00000534086 DPPA5A6NC42 116 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 TEX22C9J3V5 150 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 OR2J3O76001 311 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 TNFAIP8O95379 198 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 UBE2NLQ5JXB2 153 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 NECAP1Q8NC96 275 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 ZNF257Q9Y2Q1 563 aa13.55□□□□□ -0.24
AP003555.3-201ENST00000534086 E7EUB6 86 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 H0Y980 276 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 SULT1C2O00338 296 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 CSN3P07498 182 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 CATR1Q13166 79 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 Q8N1Y9 231 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 SAMD12Q8N8I0 201 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 SLC2A9Q9NRM0 540 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 SIGLEC8Q9NYZ4 499 aa13.54□□□□□ -0.24
AP003555.3-201ENST00000534086 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 NPIPB5A8MRT5 1133 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 BMPR1BO00238 502 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 RBFOX2O43251 390 aaKnown RBP eCLIP13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 ZNF735P0CB33 412 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 HERV-K104P61576 105 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 RPL8P62917 257 aaKnown RBP13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 C15orf32Q32M92 178 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 TMEM17Q86X19 198 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 HRASLSQ9HDD0 168 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 EHFQ9NZC4 300 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
AP003555.3-201ENST00000534086 HPRT1P00492 218 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 IGHV4-30-4P0DP06 118 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 TAS2R20P59543 309 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 FAM209BQ5JX69 171 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 ZNF818PQ6ZRF7 136 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 C19orf35Q6ZS72 473 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 SGPP2Q8IWX5 399 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 BORCS5Q969J3 196 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 RCHY1Q96PM5 261 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 FBXL7Q9UJT9 491 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 KMT2CQ8NEZ4 4911 aaKnown RBP13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 NBEAL2Q6ZNJ1 2754 aa13.52□□□□□ -0.25
AP003555.3-201ENST00000534086 A0A1B0GW64 132 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 DHFRP00374 187 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 CRYGCP07315 174 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 MYOD1P15172 320 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 AREGP15514 252 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 HLA-GP17693 338 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 PSMB6P28072 239 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 RFX2P48378 723 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 TAS2R31P59538 309 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 DHRS11Q6UWP2 260 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 CD300LFQ8TDQ1 290 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 SLC25A46Q96AG3 418 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 KCTD12Q96CX2 325 aaKnown RBP13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 ZMAT4Q9H898 229 aa13.51□□□□□ -0.25
AP003555.3-201ENST00000534086 PMP2P02689 132 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 NQO2P16083 231 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 GNRHRP30968 328 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 PRSS3P35030 304 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 AADACL3Q5VUY0 350 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 Q8N402 240 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 FANCD2OSQ96PS1 177 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
AP003555.3-201ENST00000534086 A8MZ25 164 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 PPP5D1E7EU14 171 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 NDUFB8O95169 186 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 REG1AP05451 166 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 DEFA4P12838 97 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 HIST1H1BP16401 226 aaKnown RBP13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 CTRB1P17538 263 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 NAT1P18440 290 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 TAS2R46P59540 309 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 POU2AF1Q16633 256 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 CTRB2Q6GPI1 263 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 GTSCR1Q86UQ5 136 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 OR5H2Q8NGV7 314 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 FUNDC2Q9BWH2 189 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 PLEKHA2Q9HB19 425 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
AP003555.3-201ENST00000534086 COMMD3Q9UBI1 195 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms