RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PRRG3Q9BZD7 231 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 MS4A6AQ9H2W1 248 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
CSDE1-215ENST00000533818 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 IGHV3OR16-13A0A075B7E8 117 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 IGHV3-74A0A0B4J1X5 117 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 E7EUB6 86 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 CRYZL1O95825 349 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-215ENST00000533818 GNB3P16520 340 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 PRKACGP22612 351 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 PSMD7P51665 324 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 LINC00315P59091 139 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 EFNB1P98172 346 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
CSDE1-215ENST00000533818 CYP2R1Q6VVX0 501 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 SETD6Q8TBK2 473 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 NEU1Q99519 415 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 THTPAQ9BU02 230 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 C1QTNF4Q9BXJ3 329 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 SELENOIQ9C0D9 397 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 BANF2Q9H503 90 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 TMEM138Q9NPI0 162 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 XCL2Q9UBD3 114 aa7.32□□□□□ -1.24
CSDE1-215ENST00000533818 PUS1Q9Y606 427 aaKnown RBP eCLIP7.32□□□□□ -1.24
CSDE1-215ENST00000533818 SLC16A6O15403 523 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 PDCD6O75340 191 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 CD5P06127 495 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 RPSAP08865 295 aaKnown RBP7.31□□□□□ -1.24
CSDE1-215ENST00000533818 RPL27AP46776 148 aaKnown RBP7.31□□□□□ -1.24
CSDE1-215ENST00000533818 DAD1P61803 113 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 RPL11P62913 178 aaKnown RBP7.31□□□□□ -1.24
CSDE1-215ENST00000533818 TPBGQ13641 420 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 UBE2UQ5VVX9 321 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 SPSB3Q6PJ21 355 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 LILRB2Q8N423 598 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 SVOPQ8N4V2 548 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 BSCL2Q96G97 398 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-215ENST00000533818 MAGIXQ9H6Y5 334 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 Q9N2K0 584 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 RFNGQ9Y644 331 aa7.31□□□□□ -1.24
CSDE1-215ENST00000533818 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 SMIM9A6NGZ8 99 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 J3QLW9 94 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF735P0CB33 412 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 DNAH10OSP0CZ25 163 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF19P17023 458 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 GNRHRP30968 328 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 OR2B8PP59922 312 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 HS3ST5Q8IZT8 346 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 OSR1Q8TAX0 266 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF414Q96IQ9 312 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 CHMP1AQ9HD42 196 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-215ENST00000533818 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 THYN1Q9P016 225 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 RABAC1Q9UI14 185 aa7.3□□□□□ -1.24
CSDE1-215ENST00000533818 A0A087WTM6 91 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 TRAV2A0A0B4J234 112 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 CST1P01037 141 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 ANXA8P13928 327 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 MGMTP16455 207 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 BDKRB2P30411 391 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
CSDE1-215ENST00000533818 PPP3R1P63098 170 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 TMEM69Q5SWH9 247 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 GLIPR1L1Q6UWM5 242 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF705AQ6ZN79 300 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-215ENST00000533818 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 OR5AK2Q8NH90 309 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 VN1R17PQ8TDU5 208 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 Q96M66 194 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 PDCD1LG2Q9BQ51 273 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 DCUN1D5Q9BTE7 237 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 FAAP24Q9BTP7 215 aa7.29□□□□□ -1.24
CSDE1-215ENST00000533818 IGHV3OR16-12A0A075B7B8 117 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 TRAV14DV4A0A0A6YYC5 116 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 DAPL1A0PJW8 107 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 TMEM212A6NML5 194 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF705FA8MVS1 300 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 GNGT2O14610 69 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 NUPL2O15504 423 aaKnown RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ST8SIA3O43173 380 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 CRTAPO75718 401 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 YIF1AO95070 293 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF705DP0CH99 300 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF705BP0CI00 300 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF880Q6PDB4 577 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 LRRTM1Q86UE6 522 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 OR6M1Q8NGM8 313 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 MUL1Q969V5 352 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 DGCR14Q96DF8 476 aaKnown RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 NEDD4LQ96PU5 975 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 ZNF184Q99676 751 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-215ENST00000533818 MAGT1Q9H0U3 335 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
CSDE1-215ENST00000533818 OR51E2Q9H255 320 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms