RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	HERV-K104	P61576	105 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	RHOG	P84095	191 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	KLF5	Q13887	457 aa	Predicted RBP	13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	CTF1	Q16619	201 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	POU2AF1	Q16633	256 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	TMEM17	Q86X19	198 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	FAM223A	Q8IWN6	122 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	OR6Q1	Q8NGQ2	317 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	MOB3A	Q96BX8	217 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	AKIP1	Q9NQ31	210 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	BET1L	Q9NYM9	111 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	PEF1	Q9UBV8	284 aa	Known RBP	13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	ADAM30	Q9UKF2	790 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	SORL1	Q92673	2214 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644		A0A1B0GW64	132 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	TRBV12-3	P01733	135 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	PRH1	P02810	166 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	IL6R	P08887	468 aa	Predicted RBP	13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF735	P0CB33	412 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	SPN	P16150	400 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	GNRHR	P30968	328 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	RPL27A	P46776	148 aa	Known RBP	13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	RFX2	P48378	723 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	TAS2R31	P59538	309 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	VAX1	Q5SQQ9	334 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	OR4A47	Q6IF82	309 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	SLC25A42	Q86VD7	318 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	ANKRD13B	Q86YJ7	626 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	OR5H2	Q8NGV7	314 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	OR4A5	Q8NH83	315 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	GPX8	Q8TED1	209 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	BORCS5	Q969J3	196 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	OR4C12	Q96R67	309 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	AIFM2	Q9BRQ8	373 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	ELOVL1	Q9BW60	279 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	NAA50	Q9GZZ1	169 aa	Known RBP	13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF257	Q9Y2Q1	563 aa		13.54	□□□□□ -0.24
BBS1-223	ENST00000533644	HMX3	A6NHT5	357 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	NPIPB5	A8MRT5	1133 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644		E7EUB6	86 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	LY86	O95711	162 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	HPRT1	P00492	218 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	PMP2	P02689	132 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	RPL8	P62917	257 aa	Known RBP	13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	SSX9	Q7RTT3	188 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	LYSMD2	Q8IV50	215 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	NECAP1	Q8NC96	275 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	SCPEP1	Q9HB40	452 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	SLC2A9	Q9NRM0	540 aa		13.53	□□□□□ -0.24
BBS1-223	ENST00000533644	IGLV1-51	P01701	117 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	HLA-G	P17693	338 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	ELK1	P19419	428 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	RORC	P51449	518 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	EXOSC2	Q13868	293 aa	Known RBP	13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	KLK9	Q2XQG4	91 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	AADACL3	Q5VUY0	350 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	IL34	Q6ZMJ4	242 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	OR9G4	Q8NGQ1	327 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	OR51H1	Q8NH63	302 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	CD300LF	Q8TDQ1	290 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	FXYD6	Q9H0Q3	95 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	PLEKHA2	Q9HB19	425 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	KLK9	Q9UKQ9	250 aa		13.52	□□□□□ -0.25
BBS1-223	ENST00000533644	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	SMIM31	A0A1B0GVY4	71 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	HPGDS	O60760	199 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	CRYGC	P07315	174 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	FGF2	P09038	288 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	NHLRC4	P0CG21	123 aa	Predicted RBP	13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	GP9	P14770	177 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	AREG	P15514	252 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	NQO2	P16083	231 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	HRH1	P35367	487 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	SYNJ2BP	P57105	145 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	ATP5G2	Q06055	141 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	FYTTD1	Q96QD9	318 aa	Known RBP	13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	COMMD9	Q9P000	198 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	SMAD5-AS1	Q9Y6J3	95 aa		13.51	□□□□□ -0.25
BBS1-223	ENST00000533644	CGB1	A6NKQ9	187 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	BMPR1B	O00238	502 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	PGLYRP1	O75594	196 aa	Predicted RBP	13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	OR2J3	O76001	311 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	S1PR2	O95136	353 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	MYOD1	P15172	320 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	HLA-DMA	P28067	261 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	PSMB6	P28072	239 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	OR2B8P	P59922	312 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	C15orf32	Q32M92	178 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	C19orf35	Q6ZS72	473 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	HAPLN4	Q86UW8	402 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	SNX29P2	Q8IUI4	249 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	OR6F1	Q8NGZ6	308 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	AP3S1	Q92572	193 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	HRASLS	Q9HDD0	168 aa		13.5	□□□□□ -0.25
BBS1-223	ENST00000533644	TRAV3	A0A0B4J244	114 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	DPPA5	A6NC42	116 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	UPK2	O00526	184 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	RLN1	P04808	185 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	CTRB1	P17538	263 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms