RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CACNA1BQ00975 2339 aa0.42□□□□□ -2.34
ATM-220ENST00000533526 SDCBPO00560 298 aaPredicted RBP0.41□□□□□ -2.34
ATM-220ENST00000533526 DEFA4P12838 97 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 CXCL2P19875 107 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 DDTP30046 118 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 CDK10Q15131 360 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 FAM27BQ5VT28 67 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.41□□□□□ -2.34
ATM-220ENST00000533526 UBL4BQ8N7F7 174 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 C15orf53Q8NAA6 179 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 OR8B3Q8NGG8 313 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 JOSD2Q8TAC2 188 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 ASB13Q8WXK3 278 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 TESCQ96BS2 214 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 GNPNAT1Q96EK6 184 aaPredicted RBP0.41□□□□□ -2.34
ATM-220ENST00000533526 REG4Q9BYZ8 158 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 TREM1Q9NP99 234 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 SPANXB1Q9NS25 103 aaPredicted RBP0.41□□□□□ -2.34
ATM-220ENST00000533526 EURLQ9NYK6 297 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 NAT8Q9UHE5 227 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 GMEB1Q9Y692 573 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 PCDH15Q96QU1 1955 aa0.41□□□□□ -2.34
ATM-220ENST00000533526 BAZ2BQ9UIF8 2168 aaKnown RBP0.4□□□□□ -2.34
ATM-220ENST00000533526 SETD5Q9C0A6 1442 aa0.4□□□□□ -2.34
ATM-220ENST00000533526 NAV1Q8NEY1 1877 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.4□□□□□ -2.35
ATM-220ENST00000533526 TMED7-TICAM2A0A0A6YYA0 188 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 TRBV10-2A0A0K0K1G8 114 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 TMEM269A0A1B0GVZ9 245 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 IBA57-AS1B1ANH7 110 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 COX7A2LO14548 114 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 PET100P0DJ07 73 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 HIST1H1CP16403 213 aaKnown RBP0.4□□□□□ -2.35
ATM-220ENST00000533526 NFYAP23511 347 aaPredicted RBP0.4□□□□□ -2.35
ATM-220ENST00000533526 HADHBP55084 474 aaKnown RBP0.4□□□□□ -2.35
ATM-220ENST00000533526 DNM1P34Q6PK57 102 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 DHFR2Q86XF0 187 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 BOD1L2Q8IYS8 172 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 SLC22A24Q8N4F4 322 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 ZNF439Q8NDP4 499 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 HAVCR2Q8TDQ0 301 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 ACOT12Q8WYK0 555 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 PACRGQ96M98 296 aaPredicted RBP0.4□□□□□ -2.35
ATM-220ENST00000533526 DHRS9Q9BPW9 319 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 SPACA1Q9HBV2 294 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 PRELID1Q9Y255 219 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 LHFPL6Q9Y693 200 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 MYOFQ9NZM1 2061 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 TONSLQ96HA7 1378 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 POLEQ07864 2286 aa0.4□□□□□ -2.35
ATM-220ENST00000533526 PTPRSQ13332 1948 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 METTL15P1P0C7V9 234 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 RD3LP0DJH9 198 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 CCL5P13501 91 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 CXCR4P61073 352 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 RPL30P62888 115 aaKnown RBP0.39□□□□□ -2.35
ATM-220ENST00000533526 SDHAF4Q5VUM1 108 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 TEX36Q5VZQ5 186 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 SBSNQ6UWP8 590 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 C5orf46Q6UWT4 87 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 SSX8Q7RTT4 187 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 FAM19A5Q7Z5A7 132 aaPredicted RBP0.39□□□□□ -2.35
ATM-220ENST00000533526 CD302Q8IX05 232 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 SYCE1Q8N0S2 351 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 FAM19A2Q8N3H0 131 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 TBC1D19Q8N5T2 526 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 ZNF565Q8N9K5 539 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 C9orf163Q8N9P6 203 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 OR7G1Q8NGA0 311 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 OR4C6Q8NH72 309 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 SERPINI1Q99574 410 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 YIPF3Q9GZM5 350 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 TRABDQ9H4I3 376 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 OR5AC2Q9NZP5 309 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 RSL24D1Q9UHA3 163 aaKnown RBP0.39□□□□□ -2.35
ATM-220ENST00000533526 AK3Q9UIJ7 227 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 LAMB4A4D0S4 1761 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 HEATR5BQ9P2D3 2071 aa0.39□□□□□ -2.35
ATM-220ENST00000533526 SYNRGQ9UMZ2 1314 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 ERICH2A1L162 156 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 FUOMA2VDF0 154 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 TRAPPC2LH3BP13 241 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 SMLR1H3BR10 107 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 ITGB1BP1O14713 200 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 SLC22A1O15245 554 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 HPGDSO60760 199 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 ADAP1O75689 374 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 TFPTP0C1Z6 253 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 RNASE3P12724 160 aaKnown RBP0.38□□□□□ -2.35
ATM-220ENST00000533526 FXYD2P54710 66 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 POLR2GP62487 172 aaKnown RBP eCLIP0.38□□□□□ -2.35
ATM-220ENST00000533526 PMS2P3Q13401 168 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 JOSD1Q15040 202 aaPredicted RBP0.38□□□□□ -2.35
ATM-220ENST00000533526 FAM78BQ5VT40 261 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 RIBC1Q8N443 379 aaPredicted RBP0.38□□□□□ -2.35
ATM-220ENST00000533526 OR2T27Q8NH04 317 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 ANKRD7Q92527 254 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 MS4A6AQ9H2W1 248 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 HRASLSQ9HDD0 168 aa0.38□□□□□ -2.35
ATM-220ENST00000533526 GPR84Q9NQS5 396 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms