RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 XRCC3O43542 346 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 OR2J3O76001 311 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 BRWD1-AS2P59051 145 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 FXYD4P59646 89 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 LSM3P62310 102 aaKnown RBP11.79□□□□□ -0.52
CPSF1-211ENST00000533492 ZNF45Q02386 682 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 CATR1Q13166 79 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 MSMO1Q15800 293 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 PUSL1Q8N0Z8 303 aaKnown RBP11.79□□□□□ -0.52
CPSF1-211ENST00000533492 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 ZNF257Q9Y2Q1 563 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 CSN3P07498 182 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 TGFBR1P36897 503 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 C15orf32Q32M92 178 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 FAM209BQ5JX69 171 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 IL34Q6ZMJ4 242 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 Q8N1Y9 231 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 TSPAN14Q8NG11 270 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 GIMAP1Q8WWP7 306 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
CPSF1-211ENST00000533492 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
CPSF1-211ENST00000533492 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 BMPR1BO00238 502 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 SULT1C2O00338 296 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 DHFRP00374 187 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.53
CPSF1-211ENST00000533492 IGHV4-30-4P0DP06 118 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 RPS19P39019 145 aaKnown RBP11.77□□□□□ -0.53
CPSF1-211ENST00000533492 HERV-K104P61576 105 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
CPSF1-211ENST00000533492 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 TMEM17Q86X19 198 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 OR4A5Q8NH83 315 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 BORCS5Q969J3 196 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 SIGLEC8Q9NYZ4 499 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 FBXL7Q9UJT9 491 aa11.77□□□□□ -0.53
CPSF1-211ENST00000533492 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 E7EUB6 86 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.53
CPSF1-211ENST00000533492 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 HPRT1P00492 218 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 ZNF735P0CB33 412 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 DEFA4P12838 97 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 GTSCR1Q86UQ5 136 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 Q8N402 240 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 SAMD12Q8N8I0 201 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
CPSF1-211ENST00000533492 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 EHFQ9NZC4 300 aa11.76□□□□□ -0.53
CPSF1-211ENST00000533492 C3orf84H3BNL1 204 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 NQO2P16083 231 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 HLA-GP17693 338 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 PSMB6P28072 239 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 TAS2R31P59538 309 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 CD300LFQ8TDQ1 290 aa11.75□□□□□ -0.53
CPSF1-211ENST00000533492 A8MZ25 164 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 PPP5D1E7EU14 171 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
CPSF1-211ENST00000533492 CRYGCP07315 174 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 MYOD1P15172 320 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 AREGP15514 252 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
CPSF1-211ENST00000533492 PRSS3P35030 304 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 RFX2P48378 723 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 TAS2R20P59543 309 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 ZNF2Q9BSG1 426 aaPredicted RBP11.74□□□□□ -0.53
CPSF1-211ENST00000533492 COMMD5Q9GZQ3 224 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 TUBA4BQ9H853 241 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
CPSF1-211ENST00000533492 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 A0A1B0GW64 132 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 NDUFB8O95169 186 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 OR2C1O95371 312 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 IGHV3-23P01764 117 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 PMP2P02689 132 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 REG1AP05451 166 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 CTRB1P17538 263 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 GNRHRP30968 328 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 TAS2R46P59540 309 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 CTRB2Q6GPI1 263 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 DHRS11Q6UWP2 260 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 OR2K2Q8NGT1 345 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms