RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RELBQ01201 579 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 TMEM164Q5U3C3 297 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 FAM90A1Q86YD7 464 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 OCC1Q8TAD7 63 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 CMTM2Q8TAZ6 248 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 C11orf52Q96A22 123 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 FER1L6-AS2Q96M78 137 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
CTSB-228ENST00000533455 LY96Q9Y6Y9 160 aa13.77□□□□□ -0.21
CTSB-228ENST00000533455 TRGV8A0A0C4DH27 118 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 TCF23Q7RTU1 214 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 CD177Q8N6Q3 437 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
CTSB-228ENST00000533455 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 IL36BQ9NZH7 164 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 CLCF1Q9UBD9 225 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 YTHDF2Q9Y5A9 579 aaKnown RBP13.76□□□□□ -0.21
CTSB-228ENST00000533455 M0R143 59 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 GCHFRP30047 84 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 ERVK-16P61578 105 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 MORN2Q502X0 79 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 Q6ZT83 130 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 SDSLQ96GA7 329 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 C1orf159Q96HA4 380 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 IL17BQ9UHF5 180 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 TP53TG3Q9ULZ0 132 aa13.76□□□□□ -0.21
CTSB-228ENST00000533455 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 C9JCJ5 164 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
CTSB-228ENST00000533455 YPEL1O60688 119 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 RAB4AP20338 218 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 KIR2DS2P43631 304 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 GUSBP1Q15486 140 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 MRPL52Q86TS9 123 aaKnown RBP13.75□□□□□ -0.21
CTSB-228ENST00000533455 YPEL2Q96QA6 119 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 NPVFQ9HCQ7 196 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 CBLN4Q9NTU7 201 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 AHCTF1Q8WYP5 2266 aa13.75□□□□□ -0.21
CTSB-228ENST00000533455 M0R1X1 148 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 AQP7O14520 342 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 IL6RP08887 468 aaPredicted RBP13.74□□□□□ -0.21
CTSB-228ENST00000533455 CR1LQ2VPA4 569 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 TMEM106BQ9NUM4 274 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 TCF19Q9Y242 345 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 TRGV10A0A0A0MS01 117 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 PRDX2P32119 198 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 LINC00310P59036 64 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 TPPP2P59282 170 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 ARG2P78540 354 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 C1orf210Q8IVY1 113 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 LRRC29Q8WV35 223 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 GNG12Q9UBI6 72 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 FAM186AA6NE01 2351 aa13.74□□□□□ -0.21
CTSB-228ENST00000533455 K7EN84 100 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 AREGP15514 252 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 RHOBP62745 196 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 ZNF90Q03938 601 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 LTC4SQ16873 150 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 ABHD12Q8N2K0 398 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 C1orf162Q8NEQ5 155 aaPredicted RBP13.73□□□□□ -0.21
CTSB-228ENST00000533455 TBX15Q96SF7 602 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 IFI27L2Q9H2X8 130 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 ARL2-SNX15V9GYD0 113 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 TRAV3A0A0B4J244 114 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 F2RL2O00254 374 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 AGFG2O95081 481 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 MT-CO2P00403 227 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 LGALS4P56470 323 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 RPL31P62899 125 aaKnown RBP13.73□□□□□ -0.21
CTSB-228ENST00000533455 EFNB3Q15768 340 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 TEX43Q6ZNM6 134 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 GCNT2Q8N0V5 402 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 TMEM178AQ8NBL3 297 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 DDB2Q92466 427 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 S1PR3Q99500 378 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 C20orf144Q9BQM9 153 aa13.73□□□□□ -0.21
CTSB-228ENST00000533455 MRPL18Q9H0U6 180 aaKnown RBP13.73□□□□□ -0.21
CTSB-228ENST00000533455 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
CTSB-228ENST00000533455 GRIFINA4D1Z8 144 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 ZNF705FA8MVS1 300 aaPredicted RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 ZNF705DP0CH99 300 aaPredicted RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 ZNF705BP0CI00 300 aaPredicted RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 CBLN1P23435 193 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 HOXC12P31275 282 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 THBS3P49746 956 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 LOXL3P58215 753 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 MZT1Q08AG7 82 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 LPAL2Q16609 132 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 HLA-DRB5Q30154 266 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
CTSB-228ENST00000533455 ARSJQ5FYB0 599 aaPredicted RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 MBNL2Q5VZF2 373 aaKnown RBP13.72□□□□□ -0.21
CTSB-228ENST00000533455 Q6ZWC4 215 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms