RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 C5orf66Q9H5L9 145 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 NPVFQ9HCQ7 196 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 MRPS16Q9Y3D3 137 aaKnown RBP6.78□□□□□ -1.32
CSRP1-218ENST00000533402 SPTBN2O15020 2390 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 PLPP3O14495 311 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 DHHO43323 396 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 CCL7P80098 99 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 GGTLC2Q14390 218 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 FNDC1Q4ZHG4 1894 aaPredicted RBP6.78□□□□□ -1.32
CSRP1-218ENST00000533402 CTLA4P16410 223 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 ALPK2Q86TB3 2170 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 C1QAP02745 245 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 ZNF708P17019 499 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 CLDND2Q8NHS1 167 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 TRBV5-3A0A0A0MS03 114 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 SELLP14151 372 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 CENPWQ5EE01 88 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 DEFB108BQ8NET1 73 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 OR8B12Q8NGG6 310 aa6.78□□□□□ -1.32
CSRP1-218ENST00000533402 RNF222A6NCQ9 220 aa6.77□□□□□ -1.32
CSRP1-218ENST00000533402 CD1AP06126 327 aa6.77□□□□□ -1.32
CSRP1-218ENST00000533402 CXCL1P09341 107 aa6.77□□□□□ -1.32
CSRP1-218ENST00000533402 ZFP36L2P47974 494 aaKnown RBP6.77□□□□□ -1.32
CSRP1-218ENST00000533402 DNM1P46Q6ZS02 220 aa6.77□□□□□ -1.32
CSRP1-218ENST00000533402 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.32
CSRP1-218ENST00000533402 C9orf172C9J069 976 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 H0Y980 276 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 HOXA3O43365 443 aaPredicted RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 FAM157BP0CG42 384 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 TNFAIP6P98066 277 aaPredicted RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 DSPPQ9NZW4 1301 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 MSGN1A6NI15 193 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 CRYBB3P26998 211 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 TSPOP30536 169 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 TSPAN7P41732 249 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 C10orf111Q8N326 155 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 K7ESM1 405 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 ADRA2AP08913 450 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 PRTN3P24158 256 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 SRSF5Q13243 272 aaKnown RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 TMEM155Q4W5P6 130 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 SLC25A40Q8TBP6 338 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 J3QR06 171 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 OR4D11Q8NGI4 311 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 DNAJB12Q9NXW2 375 aaKnown RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 IGLV3-16A0A075B6K0 115 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 IGHV4-39P01824 125 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 APOHP02749 345 aaPredicted RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 FOXL2P58012 376 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 NANOS3P60323 173 aaKnown RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 FOXC2Q99958 501 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 ALPK3Q96L96 1907 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 FRG2CA6NGY1 282 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 EGR1P18146 543 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 SRSF6Q13247 344 aaKnown RBP6.77□□□□□ -1.33
CSRP1-218ENST00000533402 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 RPRMQ9NS64 109 aa6.77□□□□□ -1.33
CSRP1-218ENST00000533402 ARFGEF3Q5TH69 2177 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 IGHV3-43A0A0B4J1X8 118 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 C16orf97H3BN30 126 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
CSRP1-218ENST00000533402 PRKNO60260 465 aaPredicted RBP6.76□□□□□ -1.33
CSRP1-218ENST00000533402 IGHV3-43DP0DP04 118 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 ZNF585BQ52M93 769 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 ADAMTSL5Q6ZMM2 481 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 SLC25A28Q96A46 364 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 IGHV3-15A0A0B4J1V0 119 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 SPTY2D1-AS1A0A0U1RR47 76 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 LRRC75BQ2VPJ9 315 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 TRAV14DV4A0A0A6YYC5 116 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 TMEM8BA6NDV4 472 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 CCL26Q9Y258 94 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 MFAP4P55083 255 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 FER1L6-AS1Q8NA97 138 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 CCL19Q99731 98 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 R3HDMLQ9H3Y0 253 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 TRBV24-1A0A075B6N3 115 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 LYZL6O75951 148 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 LAIR2Q6ISS4 152 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 GPR146Q96CH1 333 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 RRHO14718 337 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 FGF16O43320 207 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 IFI6P09912 130 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 AZU1P20160 251 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 KIR3DL2P43630 455 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 OR10J3Q5JRS4 329 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 MBNL2Q5VZF2 373 aaKnown RBP6.76□□□□□ -1.33
CSRP1-218ENST00000533402 AQP3Q92482 292 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 CADP27708 2225 aa6.76□□□□□ -1.33
CSRP1-218ENST00000533402 NYNRINQ9P2P1 1898 aaKnown RBP6.75□□□□□ -1.33
CSRP1-218ENST00000533402 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms