RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 LSM5Q9Y4Y9 91 aaKnown RBP12.8□□□□□ -0.36
TRIM3-213ENST00000533309 SOX21Q9Y651 276 aaPredicted RBP12.8□□□□□ -0.36
TRIM3-213ENST00000533309 POMT1Q9Y6A1 747 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 DEDDO75618 318 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 LYL1P12980 280 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 CNTFRP26992 372 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 LGALS7P47929 136 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 OR2B8PP59922 312 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 PRSS54Q6PEW0 395 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 AIFM2Q9BRQ8 373 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 MAGT1Q9H0U3 335 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 C11orf1Q9H5F2 150 aa12.8□□□□□ -0.36
TRIM3-213ENST00000533309 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
TRIM3-213ENST00000533309 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 UPK2O00526 184 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 KBTBD11O94819 623 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 SNRNP70P08621 437 aaKnown RBP12.79□□□□□ -0.36
TRIM3-213ENST00000533309 UBE2KP61086 200 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIM3-213ENST00000533309 EBI3Q14213 229 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 LAMTOR1Q6IAA8 161 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 THAP6Q8TBB0 222 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
TRIM3-213ENST00000533309 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
TRIM3-213ENST00000533309 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 FAM90A26D6RGX4 464 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 SLC25A17O43808 307 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 PET100P0DJ07 73 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 MRGPRG-AS1Q2M3A8 158 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 TMEM65Q6PI78 240 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 Q8N6K4 173 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 RNF5Q99942 180 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
TRIM3-213ENST00000533309 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 ZFP57Q9NU63 452 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
TRIM3-213ENST00000533309 MOSP00540 346 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 CRYGBP07316 175 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 PSG5Q15238 335 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 FAM120AOSQ5T036 256 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 ZNF429Q86V71 674 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 OR4A16Q8NH70 328 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.36
TRIM3-213ENST00000533309 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 TNFSF18Q9UNG2 199 aa12.77□□□□□ -0.36
TRIM3-213ENST00000533309 FOXA2Q9Y261 457 aaPredicted RBP12.77□□□□□ -0.36
TRIM3-213ENST00000533309 RNF222A6NCQ9 220 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 ARPC5O15511 151 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 KCNAB3O43448 404 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 SSSCA1O60232 199 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 RBMXL2O75526 392 aaKnown RBP12.77□□□□□ -0.37
TRIM3-213ENST00000533309 TMEM50AO95807 157 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 MYOD1P15172 320 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 CXCL2P19875 107 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 F2RL1P55085 397 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 HNF4GQ14541 408 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 VSTM2AQ8TAG5 236 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 DCUN1D4Q92564 292 aa12.77□□□□□ -0.37
TRIM3-213ENST00000533309 SYNGR2O43760 224 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 SNAPC5O75971 98 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 SPDEFO95238 335 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 BRS3P32247 399 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 DYNLT3P51808 116 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 BPIFB3P59826 476 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 HES1Q14469 280 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-213ENST00000533309 PDLIM3Q53GG5 364 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-213ENST00000533309 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 NPBQ8NG41 125 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 RBKSQ9H477 322 aa12.76□□□□□ -0.37
TRIM3-213ENST00000533309 ZNF430Q9H8G1 570 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-213ENST00000533309 MSGN1A6NI15 193 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 E5RGE8 158 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 CHST1O43916 411 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 NDUFA3O95167 84 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 RLN2P04090 185 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 PAX9P55771 341 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 PJVKQ0ZLH3 352 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 MMDQ15546 238 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 THNSL2Q86YJ6 484 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 PIFOQ8TCI5 191 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 ZDHHC16Q969W1 377 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 FBXL15Q9H469 300 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 PLSCR3Q9NRY6 295 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
TRIM3-213ENST00000533309 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms