RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PYHIN1Q6K0P9 492 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 FAM122CQ6P4D5 195 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZNF880Q6PDB4 577 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 Q6ZPA2 131 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SLC25A48Q6ZT89 311 aaKnown RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SSX9Q7RTT3 188 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 C5orf24Q7Z6I8 188 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 MOB3BQ86TA1 216 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 LYG1Q8N1E2 194 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZNF439Q8NDP4 499 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR2AK2Q8NG84 335 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 CT45A3Q8NHU0 189 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SGMS2Q8NHU3 365 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 LGALS14Q8TCE9 139 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 RTN4IP1Q8WWV3 396 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 PHF21AQ96BD5 680 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 YPEL2Q96QA6 119 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SLC25A33Q9BSK2 321 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZNF702PQ9H963 129 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 NUDT15Q9NV35 164 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 RHBDL2Q9NX52 303 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 SIGLEC9Q9Y336 463 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 ETV7Q9Y603 341 aa4.6□□□□□ -1.67
HMGB1P42-201ENST00000532126 STAB1Q9NY15 2570 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 IGHV3-72A0A0B4J1Y9 119 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 IGHV1-3A0A0C4DH29 117 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 E5RGE8 158 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 M0QZK8 103 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 FABP7O15540 132 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 HSPA12AO43301 675 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 JTBO76095 146 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 IGKV1D-33P01593 117 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 IGKV1-33P01594 117 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 CRYGBP07316 175 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 FCGR3AP08637 254 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 SCTP09683 121 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 EGR2P11161 476 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 TGFBR1P36897 503 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 CEACAM6P40199 344 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 SERPINB10P48595 397 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 ZNF137PP52743 207 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 NCS1P62166 190 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 BLCAPP62952 87 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 SRSF4Q08170 494 aaKnown RBP4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 EXOSC2Q13868 293 aaKnown RBP4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 HNF4GQ14541 408 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 KIR2DS1Q14954 304 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 CDNFQ49AH0 187 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 LY6G6FQ5SQ64 297 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 MMD2Q8IY49 270 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 Q8N2B8 174 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR5AU1Q8NGC0 362 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR4A4PQ8NGN8 299 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR13F1Q8NGS4 319 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 GPX8Q8TED1 209 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 TMEM37Q8WXS4 190 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 CXorf58Q96LI9 332 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 TREM1Q9NP99 234 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 OR1A1Q9P1Q5 309 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 NSG2Q9Y328 171 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 MOB4Q9Y3A3 225 aa4.59□□□□□ -1.67
HMGB1P42-201ENST00000532126 SAA2-SAA4A0A096LPE2 208 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 RAB29O14966 203 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 MOSP00540 346 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 GSTT2P0CG29 244 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 GSTT2BP0CG30 244 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 SAA2P0DJI9 122 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 DTYMKP23919 212 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 VDAC2P45880 294 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 BCAP31P51572 246 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 GNG2P59768 71 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 KRTAP10-3P60369 221 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 VBP1P61758 197 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 CTAG1AP78358 180 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 CX3CL1P78423 397 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 PITPNAQ00169 270 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 HERPUD1Q15011 391 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 SRSF7Q16629 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 ABCA11PQ4W5N1 156 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 HACD4Q5VWC8 232 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 RNASEKQ6P5S7 137 aaKnown RBP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q6ZNX1 250 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 ODF3L1Q8IXM7 274 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 KLHDC1Q8N7A1 406 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR5H6Q8NGV6 325 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR2T10Q8NGZ9 312 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR52I2Q8NH67 350 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR10J5Q8NHC4 309 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 MAFIPQ8WZ33 124 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 SLC25A38Q96DW6 304 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 MRPL53Q96EL3 112 aaKnown RBP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 ST6GALNAC5Q9BVH7 336 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 PARP12Q9H0J9 701 aaKnown RBP4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 IFI27L2Q9H2X8 130 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 DIABLOQ9NR28 239 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF230Q9UIE0 474 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms