RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NEIL1Q96FI4 390 aaPredicted RBP14.17□□□□□ -0.14
BRCA2-204ENST00000530893 OR4F4Q96R69 305 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 PARLQ9H300 379 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 C16orf97H3BN30 126 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 RRHO14718 337 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 IGHV3-7P01780 117 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 CCKARP32238 428 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 NBL1P41271 181 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 HSPE1P61604 102 aaKnown RBP14.17□□□□□ -0.14
BRCA2-204ENST00000530893 C1orf229Q6ZS94 237 aaPredicted RBP14.17□□□□□ -0.14
BRCA2-204ENST00000530893 C22orf34Q6ZV56 151 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 TCF23Q7RTU1 214 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 OR10A7Q8NGE5 316 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 TXNDC17Q9BRA2 123 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 NPVFQ9HCQ7 196 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 DMXL1Q9Y485 3027 aa14.17□□□□□ -0.14
BRCA2-204ENST00000530893 TRAV3A0A0B4J244 114 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 A0A1W2PPV4 95 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 PDE6DO43924 150 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 CDX1P47902 265 aaPredicted RBP14.16□□□□□ -0.14
BRCA2-204ENST00000530893 ADIRFQ15847 76 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 OR4A47Q6IF82 309 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 LYG1Q8N1E2 194 aa14.16□□□□□ -0.14
BRCA2-204ENST00000530893 RPUSD4Q96CM3 377 aaKnown RBP14.16□□□□□ -0.14
BRCA2-204ENST00000530893 RPUSD1Q9UJJ7 312 aaKnown RBP14.16□□□□□ -0.14
BRCA2-204ENST00000530893 hADV38S2A0JD32 116 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 PAGE4O60829 102 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 RPL23P62829 140 aaKnown RBP14.15□□□□□ -0.14
BRCA2-204ENST00000530893 DOLPP1Q86YN1 238 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF383Q8NA42 475 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 LEAP2Q969E1 77 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 CCL13Q99616 98 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 DOK5Q9P104 306 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 LINC00312Q9Y6C7 94 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF292O60281 2723 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 NKX6-3A6NJ46 265 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 C11orf94C9JXX5 98 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 FNDC10F2Z333 226 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BKO60814 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BJP06899 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BOP23527 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BBP33778 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 TDGF1P3P51864 188 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BDP58876 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BCP62807 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST2H2BEQ16778 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.15□□□□□ -0.14
BRCA2-204ENST00000530893 SLC25A48Q6ZT89 311 aaKnown RBP14.15□□□□□ -0.14
BRCA2-204ENST00000530893 DEFB108BQ8NET1 73 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BHQ93079 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 ANAPC16Q96DE5 110 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BNQ99877 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 HIST1H2BMQ99879 126 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 ENY2Q9NPA8 101 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 PRNDQ9UKY0 176 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 ZNF257Q9Y2Q1 563 aa14.15□□□□□ -0.14
BRCA2-204ENST00000530893 LSM4Q9Y4Z0 139 aaKnown RBP14.15□□□□□ -0.14
BRCA2-204ENST00000530893 A0A0G2JNJ9 132 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 CLN5O75503 358 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 GYPAP02724 150 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 TRGC2P03986 189 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 MEF2CQ06413 473 aaPredicted RBP14.14□□□□□ -0.15
BRCA2-204ENST00000530893 DUX4L9Q6RFH8 374 aaPredicted RBP14.14□□□□□ -0.15
BRCA2-204ENST00000530893 ABHD12Q8N2K0 398 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 SLC24A4Q8NFF2 622 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 GGTLC1Q9BX51 225 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 MS4A5Q9H3V2 200 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 Q9UFV3 132 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 RAI1Q7Z5J4 1906 aaPredicted RBP14.14□□□□□ -0.15
BRCA2-204ENST00000530893 IL6RP08887 468 aaPredicted RBP14.14□□□□□ -0.15
BRCA2-204ENST00000530893 S100PP25815 95 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 NPY1RP25929 384 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 ATP5IP56385 69 aaPredicted RBP14.14□□□□□ -0.15
BRCA2-204ENST00000530893 UTF1Q5T230 341 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 FAM216BQ8N7L0 139 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 TMEM170AQ8WVE7 144 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 MGST2Q99735 147 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 PYGO2Q9BRQ0 406 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 GAL3ST2Q9H3Q3 398 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 PXMP4Q9Y6I8 212 aa14.14□□□□□ -0.15
BRCA2-204ENST00000530893 TET2Q6N021 2002 aaPredicted RBP14.13□□□□□ -0.15
BRCA2-204ENST00000530893 DYSFO75923 2080 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 ELOA3CA0A087WX78 387 aaPredicted RBP14.13□□□□□ -0.15
BRCA2-204ENST00000530893 TRAV38-1A0A0B4J264 116 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 C17orf100A8MU93 164 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 YIF1AO95070 293 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 NDUFA6P56556 154 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 RAB31Q13636 194 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 RTL8BQ17RB0 113 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 NCMAPQ5T1S8 102 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 CISD2Q8N5K1 135 aaKnown RBP14.13□□□□□ -0.15
BRCA2-204ENST00000530893 NANPQ8TBE9 248 aa14.13□□□□□ -0.15
BRCA2-204ENST00000530893 F6UZH7 168 aa14.12□□□□□ -0.15
BRCA2-204ENST00000530893 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
BRCA2-204ENST00000530893 STAG3L2P0CL84 134 aa14.12□□□□□ -0.15
BRCA2-204ENST00000530893 STAG3L3P0CL85 134 aa14.12□□□□□ -0.15
BRCA2-204ENST00000530893 ADIPOQQ15848 244 aa14.12□□□□□ -0.15
BRCA2-204ENST00000530893 TEPPQ6URK8 271 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms