RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR5D14Q8NGL3 314 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 RFESDQ8TAC1 157 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 CNIH3Q8TBE1 160 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 PLPPR1Q8TBJ4 325 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 TNFAIP8L1Q8WVP5 186 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 TSEN15Q8WW01 171 aaKnown RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 TRUB1Q8WWH5 349 aaKnown RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 PELI1Q96FA3 418 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 MYCBPQ99417 103 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-213ENST00000530784 GPER1Q99527 375 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 FAM192AQ9GZU8 254 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 ABCG5Q9H222 651 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 DCLRE1BQ9H816 532 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 LINC00574Q9H8X3 128 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 DHRS4-AS1Q9P1J3 65 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 CELA1Q9UNI1 258 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 FBXO7Q9Y3I1 522 aa4.96□□□□□ -1.62
CSDE1-213ENST00000530784 COL7A1Q02388 2944 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 IGHV3-72A0A0B4J1Y9 119 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 TRAV39A0A0B4J263 110 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 IGHV1-3A0A0C4DH29 117 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 TMEM30CPA0ZSE6 113 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 TMEM212A6NML5 194 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 SNTNA6NMZ2 147 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 SEC14L6B5MCN3 397 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 J3QRE1 110 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 SDCBPO00560 298 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-213ENST00000530784 GABRPO00591 440 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 RAB3AP20336 220 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 IL3RAP26951 378 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 ID1P41134 155 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 MRPL28Q13084 256 aaKnown RBP4.95□□□□□ -1.62
CSDE1-213ENST00000530784 EBI3Q14213 229 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 KIR2DS1Q14954 304 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 RSU1Q15404 277 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF674Q2M3X9 581 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 PIGYQ3MUY2 71 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 LINC00242Q5T6M2 205 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 C1orf146Q5VVC0 180 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 MEDAGQ5VYS4 303 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 SYS1Q8N2H4 156 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 Q8N6K4 173 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 OR8H1Q8NGG4 311 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 OR10K1Q8NGX5 313 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 OR2T10Q8NGZ9 312 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 OR5AK2Q8NH90 309 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 C4orf3Q8WVX3 66 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 FAM46BQ96A09 425 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 RASL11BQ9BPW5 248 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 ORC6Q9Y5N6 252 aa4.95□□□□□ -1.62
CSDE1-213ENST00000530784 C3orf84H3BNL1 204 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF253O75346 499 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 OR7C1O76099 320 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 MOSP00540 346 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 GZMHP20718 246 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 CD1BP29016 333 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 SNRPGP62308 76 aaKnown RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 C8orf31Q8N9H6 132 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 Q8N9W7 124 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 SUMF2Q8NBJ7 301 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 OR51A2Q8NGJ7 313 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 OR52M1Q8NGK5 317 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 OR6M1Q8NGM8 313 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 NEK7Q8TDX7 302 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 RTN4IP1Q8WWV3 396 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 C5orf30Q96GV9 206 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 PDCD1LG2Q9BQ51 273 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 HSPB9Q9BQS6 159 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 ISG20L2Q9H9L3 353 aaKnown RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 FAM212BQ9NTI7 297 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 TAS2R4Q9NYW5 299 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 ST3GAL6Q9Y274 331 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 ZNF256Q9Y2P7 627 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-213ENST00000530784 KIF25-AS1Q9Y6Z4 181 aa4.94□□□□□ -1.62
CSDE1-213ENST00000530784 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 IGHV3-43A0A0B4J1X8 118 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 SMIM30A4D0T7 59 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 C15orf65H3BRN8 121 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 AIPO00170 330 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 EI24O14681 340 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 ORC5O43913 435 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 KBTBD11O94819 623 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 CDRT1O95170 752 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 FADS2O95864 444 aaKnown RBP4.93□□□□□ -1.62
CSDE1-213ENST00000530784 IGHG4P01861 327 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 CD2P06729 351 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 OR8U8P0C7N1 319 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 IGHV3-43DP0DP04 118 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 SOX6P35712 828 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 INSL3P51460 131 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 GBX2P52951 348 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-213ENST00000530784 RBM11P57052 281 aaKnown RBP4.93□□□□□ -1.62
CSDE1-213ENST00000530784 PPP3R1P63098 170 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 NDPQ00604 133 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 P2RY14Q15391 338 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 Q3ZCU0 254 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 LINC00596Q86U02 117 aa4.93□□□□□ -1.62
CSDE1-213ENST00000530784 LHFPL3Q86UP9 236 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms